Lolium rigidum (rigid ryegrass): 124670884
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Entry
124670884 CDS
T09103
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124670884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124670884
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
124670884
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124670884
Prokaryotic type
124670884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
YosD
Motif
Other DBs
NCBI-GeneID:
124670884
NCBI-ProteinID:
XP_047063308
LinkDB
All DBs
Position
7:10641891..10647825
Genome browser
AA seq
309 aa
AA seq
DB search
MAPPPSPPTAPKTIADFFVRPAKRLRSSATATIIPAASLSSSSSPSPSSLSPEQRRRADT
NLALARARRNLRLAESKASGGAAKLEELLVEETWLEALDGELRKPYALDLSSFVAHERTH
GKVPVYPPTHLVFHALHTTPFNNVKAVIIGQDPYHGPGQAMGLSFSVPEGIKIPSSLQNM
FKELHKDLGCTVPSHGNLERWAVQGVLMLNTVLTVREHQANSHAKKGWEQFTDAVIKTIS
EKKSGLVFLLWGNSAQAKIRLIDETKHHILKSAHPSGLSAHRGFFGCRHFSQTNQILERL
GLSTIDWQL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgccgtcacctcccaccgcccccaaaaccatcgccgacttcttcgtccgc
cccgccaagcgcctccgctccagcgcgaccgccaccatcatccccgccgcctccctctcc
tcctcctcctcccccagcccctcctcgctctcgccggagcagcgtcgccgcgccgacacc
aacctcgccctcgcccgcgcgcgccgcaacctccgccttgccgagtccaaagcgtccggg
ggcgccgcgaagctggaggagctgctcgtggaggagacgtggctggaggcgctcgacggg
gagctgcgcaagccctacgcgctcgacctctccagcttcgtcgcccacgagcggacgcac
ggcaaggtgcccgtctacccgccgacccacctcgtcttccacgcgctccacaccaccccg
ttcaacaacgtcaaagccgtcatcatcggccaggatccataccatggtcctggtcaggcc
atgggattgtcgttttcagtaccagaggggatcaaaattccttcaagcttacagaacatg
tttaaagagctgcataaagatctaggttgtactgtcccatcccatgggaatttggaaaga
tgggctgtgcagggtgttcttatgctcaatactgtgctaacagtgagggagcaccaagcc
aactctcatgccaagaaaggatgggagcagttcactgatgctgtcattaagacaatatca
gaaaagaaatcaggattagtgtttcttctctggggaaactcagctcaagctaagataaga
ctaattgatgaaactaaacatcacattttaaagtctgcccatccatcaggcctgtctgcg
cacagaggtttctttggatgcaggcacttttcgcagacgaatcagatcctggagaggcta
gggctatccaccatcgactggcagctctag
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