Lolium rigidum (rigid ryegrass): 124671039
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Entry
124671039 CDS
T09103
Name
(RefSeq) DNA topoisomerase 1 beta-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124671039
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
124671039
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Topoisomerases
124671039
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
RodZ_C
MC1
DUF3450
Motif
Other DBs
NCBI-GeneID:
124671039
NCBI-ProteinID:
XP_047063435
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All DBs
Position
7:24094081..24098125
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AA seq
758 aa
AA seq
DB search
MSAVFMFDGDDDDAPPLCQESNTVDGDKSKLKRPHVAEVDHLMSDADSDDDTPIGLRKKA
ASKRGCSASYEDSEDNKTLAARFLRVTRGGTSSVSIPSSKDKPVLPNISNAIKRPCDSNS
QPTSQSALKKAKCSDGTSSASASAKREPRGKDNGNDSIHLAQTRQTTGESSKRKDPLAKN
IVKKSPSSSKDNKKGKAKKNPQLSKTTEACQGRKKWSTLVHNGVLFPPPYKPHGVQMLYN
GQPVTLTPEQEEVATMFAVMKDTEYASKETFTNNFFNDWRNILGTKHVVKKFQHCDFTPI
YEWHLQEKEKKKQMTTEEKKALREERVKQDDKFMWAFVDGVKEKVGNFRVEPPGLFRGRG
EHPKMGRLKRRIRPSDITINIGEGAPVPVCPIHGESWKEVKHDNTVTWLAFWNDPINQKE
CKYVFLAASSSLKGQSDKEKYEKARKLKDHIHNIRVNYTKDFRSKDQAKKQIAVATYLID
KLALRAGNEKDDDEADTVGCCTLKVENVTCLPPNRLQFDFLGKDSIRYLNTVEVELPVYQ
AIKEFCAGKHKGEAVFGKLDTNKLNAHLKDLMPGLTAKVFRTYNASITLDTILNKETEDA
TLLEKITVYQRANKEVAIICNHQRAVSKSHDSQITKLNEKIDELKALRDGLEVDLEKAKK
GKPLGYDEDGKRKRNLTPEVLVNKISSVESRIQKMEIDMKTKEELKTVALGTSKINYLDP
RITVAWCKTREVPIEKIFSKTILAKFGWAMDVDPDFRF
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtatttatgtttgacggagacgacgatgacgctccaccactttgtcaggag
agtaacacggtggatggtgataagagtaaactgaaaagacctcatgtagcagaagttgat
cacctcatgtcggatgcggattcagacgatgacacgccaattgggttaaggaaaaaggct
gcttcaaaacgtggatgtagtgcctcttatgaagattcagaagataacaagacattggct
gcccggtttttgcgagttactcggggtggcacatcatctgtgagtattccaagttccaag
gacaaaccagtcctacccaacatcagcaatgcaatcaaaaggccatgcgatagcaacagc
caaccaacttcacaatcagctcttaagaaggcaaagtgttcggatggtacttcttctgcc
tccgcaagtgccaaaagagaacccaggggcaaggataatggcaatgacagcatacatcta
gcacaaacaaggcagacaaccggcgagtcttcgaaaagaaaggacccgcttgcaaagaat
attgtgaagaagagtccttcatcttctaaggacaacaaaaaaggaaaagcaaagaaaaat
ccacagctctcaaagacaacggaggcctgtcaaggtcgaaagaagtggtctactttggtg
cacaatggtgttcttttcccccctccgtacaagcctcatggtgtccagatgctttacaat
gggcaaccggttactctcactccagaacaggaggaggtcgcaaccatgtttgctgtgatg
aaagacacagagtatgcatccaaggaaacgtttaccaacaacttcttcaacgactggaga
aatattcttggtacaaaacatgttgtcaaaaagtttcagcattgcgatttcacacccatc
tatgaatggcaccttcaggagaaggagaagaagaaacagatgaccacagaggagaagaaa
gcattgcgagaagagagagtgaaacaagatgataagtttatgtgggctttcgttgatggt
gtaaaagagaaggttggcaatttcagagtagaaccgcctggcttattcaggggacgagga
gaacatccaaagatgggaagactgaagcgacgcatccgaccaagtgatattacaataaac
atcggagaaggagctccagtcccggtgtgtcctatacatggagaaagctggaaagaagtt
aaacatgacaatactgttacatggttggccttttggaatgatccgataaaccaaaaagaa
tgcaaatatgttttcctggcggcaagcagctcactgaagggacaaagtgacaaggaaaaa
tacgaaaaggctcggaaactgaaggatcacatacacaatatacgtgtgaattacaccaag
gatttcaggagcaaagatcaggcaaaaaaacaaattgcagtggcaacataccttatagat
aaactagccctcagggcgggaaatgaaaaggatgacgatgaggctgatactgttggttgt
tgtacgctgaaggttgaaaatgttacctgtcttcctcctaacagactgcagttcgacttc
cttggtaaagattctattagatacttgaacaccgtagaggttgaactacctgtgtaccag
gcgattaaggaattctgtgctggaaaacataagggagaggctgtctttggcaagcttgat
acaaataaactaaatgctcatctaaaagacttaatgcctggccttactgcaaaagtgttc
cgtacatacaatgcttccataactttggacactatattgaacaaagaaactgaagatgca
acccttcttgaaaaaattacggtctatcagcgagcaaacaaagaggttgctataatctgt
aaccatcagcgtgctgtctcgaaatcacatgattcccaaattactaaactgaatgaaaag
attgacgaattaaaggccctgagggatgggttggaagtagacctggagaaagcaaaaaaa
ggaaaacctctaggttatgatgaagatgggaagcgaaagagaaatttgacccctgaagta
ttggtgaataagatctcttcagtcgaaagcaggatacagaaaatggaaatcgatatgaag
actaaagaggaattgaagacagtggcactaggaacatcaaagatcaactaccttgatcct
agaattaccgtggcatggtgcaaaacccgcgaagtccctattgagaagattttcagcaaa
acaatcctcgcaaaatttggatgggcaatggatgtggacccggatttcagattctag
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