Lolium rigidum (rigid ryegrass): 124671068
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Entry
124671068 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: endonuclease MutS2-like
KO
K07456
DNA mismatch repair protein MutS2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124671068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124671068
DNA repair and recombination proteins [BR:
lrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124671068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Amidohydro_1
Smr
Amidohydro_3
MSSS
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
124671068
NCBI-ProteinID:
XP_047063460
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Position
7:complement(26777404..26785830)
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AA seq
1354 aa
AA seq
DB search
MPGLIDVHAHLDEPGRAEWEGFSTGTRAAAAGGITTLVDMPLNSFPSTVSKETLKLKLDA
ARDKLYVDVGFWGGLVPENALNPSKLESLLNAGVLGLKSFMCPSGINDFPMTNSTHIEEG
LVTLAKYKRPLLIHAERIPDVASDDELNGELDPRSYATYLKSRPATWEESAIRDLKRAMQ
DTEVGGRSEGAHLHIVHLSDAETTLDLLKDAKQSGARLSIETCPHYLAFSAEEVPDGDTR
FKCSPPIRNATNKENLWGALLDGHIDMLSSDHSPSTPDLKLMEEGNFMKAWGGISSLQFV
LPVTWSHGKKYGITLNQLVSWWSEKPAELAGQKNKGAILPGYHADIVVWKPEAQFHLDDS
HAVYHKHRNISAYLGKELSGHVLSTFVRGNLVFAEGKHAGAACGVTILAKWLSAAARSSS
HLRLRREAETSRFHSDGHGRHHRLKPRSPPPIDTPFHGSPPHPPPPRSTRFPVTPQHGRR
LLRLPNPNVPRLVGNSGGGGGATPGDGVRARVGRRVRAAGRLRRHRAGRAACAEGRVPVG
RSREDSERLLEQTAAAVALLSSLTPLDFGGVGDVSAVVAAAARGRLLAVREICGVGRSLR
AARGVFEQLNGLAEEMPDGRYSPLVDILQDCDFLTELVQMIEFCLDSNLSMVLDQASDKL
GAIRKERRMNIDVLESLLRDASTKIFQAGGVDSPLVTRRRSRMCVGVKASHKHLVPGGIV
LSSSGSGATYFMEPRDAVQLNNTEVKLAGDERAEELAVLGLLTSRIAASRLKIRHLMGKI
LELDLACARGSYALQINGVRPAFSDRDNSTRLDPSSACSVFIEGIQHPLLLEQFRGIVKE
SDAEVGNGQLSDEVCVSAMPVPLDMRVKNDTRIVVISGPNTGGKTATMKTLGLASLMSKA
GMFFPAKGKPRLPWFDQVLADIGDHQSLENSLSTFSGNISRLRKIVQVVSKDSLVLIDEI
GSGTDPSEGVSLSTSILKYLASRLNLAIVTTHYADLSRLKSVDDRFENAAMEFCLETLKP
TYRILWGSTGNSNALSIAKSIGFDQKILDRAQEWVEKLLPDKQKERQGLLYDSLRDERNL
LESQANEAASVLSDVEGLYNEILSEADDLDNRVAALRAIESQKVQQELKFVKTQMDLIIK
NFEVQLQNSKLEQYNSAMRKAEAATASLAAAHQPTEFTFSDDENKSSYVPQIGDKVYVEG
LGGGSTATVVEILSEDGSCIVQYGKIKARTKNNKMKLAQRDTKETSASSVQRKGRTVKRS
PAEATQGASISFTPAVQTSKNTVDLRGLRVAEASHELQMAIDGCRSYQVLFIVHGMGTGA
VKECALDILRSHPRVAKIEDESPLNYGCTVAYIE
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcctcatcgacgtgcacgcgcacctcgacgagcctgggcgagcggagtgggag
gggttctccaccggcaccagagccgccgctgcaggtggaataacaacgttggtagacatg
cccctcaacagcttcccttcaacggtttctaaagagactctcaaactcaagttggatgcg
gctcgggataaactatatgttgatgtcgggttttggggaggccttgtaccagagaacgcc
ttgaacccaagtaaattggagagcctactgaatgcaggagtgttaggacttaagtccttt
atgtgtccctctggtatcaacgacttccccatgacaaattcaactcatatcgaggagggc
ctggttacgttagcaaagtacaagaggcccttacttatccacgcagaacgcataccggat
gtcgcgagtgatgatgagcttaatggcgaactagatcctcgatcttatgcaacatatctc
aagtcaagaccagcaacatgggaggaatcagctatcagagatttgaaacgtgccatgcag
gacacagaagtgggtggtcggtcagaaggagctcaccttcacattgttcatctctcagat
gcagaaaccaccctcgaccttctaaaggatgcgaaacagagtggcgcaagactcagcata
gaaacctgtccacattacctcgcattttcggccgaagaagttccagatggggatactcgt
ttcaagtgctctcctcctatacgcaatgccaccaacaaggaaaatctctggggagctctg
cttgatggccacatcgacatgctcagctcagaccactcgccgtctactcctgatctcaag
ctgatggaggaaggcaacttcatgaaggcatggggaggtatatcatctctgcagtttgtt
ctccccgtaacatggtcacacgggaaaaagtacggcatcacgctgaatcagctagtctcg
tggtggagtgagaagcccgctgagcttgcggggcaaaagaacaagggggctattctgccg
ggttaccacgcggacattgtggtctggaaacctgaggcgcagttccatctcgatgacagc
catgccgtataccacaagcacaggaacatttcggcgtatctagggaaagagctctccggc
catgtcttgtcaacgttcgtgagagggaacctggtgttcgccgaagggaagcatgccggg
gctgcttgcggtgtcaccatcctcgcaaagtggctgagcgcagccgcgcgttccagctcc
cacctccgtctccggcgggaagcggagacctcccgcttccactccgacggccatggccgc
caccaccgcctcaaacctcgctctcctcctcccatcgacactccattccacggttcgcct
ccccacccgcctcctccgcgttccacgcgcttccccgttacgcctcagcacggccgccgc
ctcctccggctcccgaaccctaacgtcccccgcctcgtcggaaactccggaggcggcgga
ggagctacgcctggagacggagtccgcgctcgagtggggcggcgtgtgcgcgcggctggc
cgacttcgccgccaccgcgcgggccgcgctgcctgcgcggagggccgggtccccgtcggc
cggagccgggaggatagcgagcggctgctcgagcagaccgccgcagcggtggcgttgcta
tcgtcgttgacgccgctggatttcggaggcgtgggcgacgtgtcggccgtcgtcgccgcc
gcggcacggggacgactgctcgcggtgagggagatatgcggcgtcgggcgcagcctccgg
gccgcgcgaggcgtgtttgagcagctcaacgggctcgccgaggagatgccagatgggagg
tactctcctcttgtggatatactgcaggactgcgacttcttgacagaacttgtacagatg
atagagttctgcctcgactccaacctttcgatggtcctcgaccaggccagcgataaacta
ggagcgatccgcaaggaaaggaggatgaacatcgacgtgttagaatctctgctgagagat
gcatccacgaagatcttccaggccggtggggttgacagccctctggtcactaggcgccgc
tctagaatgtgtgttggtgttaaagcttcgcacaagcatttggtccctggtggaattgtt
ctgagttccagtggctctggtgcgacgtactttatggagcccagagatgctgtccagctg
aacaacacggaggtaaaacttgcaggcgatgagagagccgaggagctggcagtattgggc
ttgctaacttcaaggatagcagcttcccgactgaagatcaggcatttgatggggaaaata
ttggaactggacctggcttgtgctagaggttcatatgccctacagataaatggtgtgagg
ccagccttcagtgacagggacaatagtactcgattggacccaagcagcgcatgttcagta
tttatcgagggcattcagcatcctttgcttcttgagcagttccgtggaattgtgaaagaa
tcagatgccgaagtggggaatggacagctttctgatgaagtctgtgtctctgcgatgcct
gttccgctggacatgcgtgtgaagaacgatactaggatagttgtgatctctggacccaac
actggaggtaaaaccgctactatgaagaccttgggattggcctctctgatgtcaaaggct
ggaatgttcttcccagccaaagggaagcctaggcttccgtggtttgatcaggttcttgca
gacattggtgaccatcagtcgctggagaatagcctctctaccttcagtgggaacatatca
cgtcttcgcaagattgtacaagttgtatcgaaagactctcttgttcttattgatgagatt
ggcagtggtactgatccatcagaaggtgtatccctttcaaccagcattttgaagtatctt
gctagtagactaaacttggccatcgtgacaacccattatgctgatctaagtcgtctcaaa
tctgttgatgatcgatttgagaatgctgcaatggaattttgtttggaaactctgaaacca
acatatcgaatcttgtggggcagtactggtaattcaaatgcattaagcattgcaaagtca
attggttttgatcagaaaatacttgatcgggcacaagaatgggtcgaaaaattattgcct
gataaacagaaggaacgtcaaggtttactttacgactctctacgagacgaacggaacctt
ctggagtctcaggcaaatgaagcagcatctgttctttcagatgttgagggtctgtacaat
gagattctttcagaagctgatgacctagataaccgagtagctgctttgagggcaatagag
tctcagaaggtacaacaagagttgaagtttgtgaagactcagatggacctgataatcaaa
aactttgaagttcagcttcagaattcgaaactggaacagtacaactcagcaatgaggaaa
gcagaagctgcgactgcttcattagctgctgcccatcagccaactgagtttactttcagt
gacgatgaaaacaagagttcttatgttccacaaattggagacaaagtttatgttgaaggg
ctgggagggggaagtacggctactgttgttgagatactcagtgaagatgggagctgtatt
gttcaatatgggaaaataaaggcccggaccaagaataacaagatgaagttggcccaaaga
gacacaaaggaaacatcagcttcttccgtacaaagaaagggacggacagtgaagcggtct
ccggcagaggcaacgcagggcgccagcatctccttcaccccggccgtgcagacgtccaag
aacacggtggacctgaggggactgcgggtcgctgaggcgtcccacgagctccagatggcc
atcgatgggtgcaggtcttaccaggtcctcttcatcgtccatggtatgggcaccggcgcg
gtgaaggagtgcgctctggatatcctccgcagccatccccgggtggccaagatcgaggat
gagagccccctaaactacggctgcactgtcgcctacattgagtaa
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