Lolium rigidum (rigid ryegrass): 124671081
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Entry
124671081 CDS
T09103
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124671081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124671081
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
124671081
Ubiquitin system [BR:
lrd04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
124671081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-C_UBE2O
vRNAP_plug
Motif
Other DBs
NCBI-GeneID:
124671081
NCBI-ProteinID:
XP_047063471
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All DBs
Position
7:complement(28619172..28622440)
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AA seq
939 aa
AA seq
DB search
MDVVAVASPNIYLDDLVSFGRGILRQGIVHQDATVNNSLPVDTFEILLIDNSVVYKKAGD
IRVLDRSHLHLGQVVGSASDIAGQIGVVTGVTTLLDLAERDSRGTATGLIRGVSPSNVRR
VRFLSLGDFVVSGLWLGQVVEVSVDVDVLFDDGAVCRVTNADLKILQEVDGTRSLKYQRH
QMNCNFYPGQSVTGRNRLSLFKTARWLNGYWNPCRNVGTVLKVETSGVLVYWIASMHCGM
DKELVEASAPPAYQHPDELTFFCAASSCSWGVADQCFYREPRSTKTDDDNQDQEEEEEEE
KDDPCAENNQDVIDADQDAPMPTPTKQKDVIFYGKQLRKVFFEGHRRERRPQVRRHVEVE
FPMTVASTSTSVDVLWQDGTLQRGIPSATLVPFYMMNEHEFFPGQHVVENNTAGDTNGND
DDTTRRVGVVRSVDCKDQTVCVSWFKAGMCPDEAREVECIDTMSAYDLKLNHSPHYGDIV
VRLLQSDSTDDGGSAALDGQKKKNADDADLSWVGHVVDLPDGHVQVKWGDGSMSMVMPHE
VVAVTEENYIDLRTEMGDWVEDDDMDDAPEEAANTDNNDPHKPTNYCGVENEDLAAMTTN
LFGFAIRSFLQFTSDLVARGKGYLINHQPPPSSLLPSSEVPGGEAMENIVVECDEMFSFP
RFDVLQITPQDHHYLDDANQGGSRGKNWAKVVQKEWKNLENDLPETIYTRVFEDRMDLLR
VVMVGASGTPYHHGLFFFDLQIPSSYPTEPPQVYYHSYGLRLNPNLYESGTVCLSLLNTF
DGEGTELWSSVTSSLLQVVVSIQGLVLNDQPYYNEAGYETLVGKPEGRRNALPYSENAYL
LSLRTMLHVLRRPPRGFEEFVKDHFRRHGRFVLMTCDAALQGCVVGDAHATEATKEQPCS
AGLKLALANMLPILVAAFTEIGAQGCEEFQKAYALSTAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgtcgccgtggcatcaccaaatatttacttggacgacctggtgagttttggg
cgcgggatcctccgccaagggatagttcaccaggacgccacggtgaacaactctctgccc
gtcgacacgttcgagatcctcctcatcgacaactctgtcgtctataagaaggcaggggac
atcagggtgctcgacaggagccacctgcacctcgggcaggtggttgggtcggcgtccgac
attgctggccagatcggcgtcgtcaccggcgtcaccacccttctggacctggccgagcgt
gacagccgaggcacggcgactgggctcatcaggggtgtgtccccatccaacgtgcggcga
gtgaggttcctcagccttggtgacttcgtcgtgtctgggctgtggctcggccaggtggtc
gaggtgtctgtcgatgtcgacgtccttttcgacgatggcgctgtttgcagggttaccaat
gcagacttaaagattctacaggaagtggatggcacccgcagcctcaaatatcagcggcac
caaatgaactgcaacttctacccagggcagagcgtcaccgggcgaaaccgtctttccctc
ttcaaaacggcacgctggcttaatggctactggaatccctgtcgcaacgtaggcaccgtc
ctcaaggtggagacatccggcgttctcgtctactggattgcgtcgatgcactgtggcatg
gacaaggagcttgttgaggcatccgctccgccagcataccagcaccccgatgaactgacc
ttcttctgcgccgcgtccagttgcagctggggggtagctgaccaatgcttctatcgagaa
cctagatcgaccaaaaccgatgatgataatcaggaccaggaggaggaggaggaggaggaa
aaggatgacccatgcgctgaaaacaatcaggacgtgattgatgctgaccaagatgcacca
atgcccacgcccacaaagcagaaggatgtgattttttacgggaagcagctgaggaaggtc
ttctttgaggggcacaggcgggagcgacgcccacaagtcaggaggcatgtggaggtggag
tttcccatgactgtcgccagcaccagcacctctgttgacgtgctatggcaggacggcacc
ctgcagcgtggcataccttcagcgaccctcgtccccttttatatgatgaatgagcacgag
ttcttccccggacaacacgtcgtcgaaaacaatactgccggtgatactaatggaaacgac
gatgacacaacaagacgtgtgggcgtcgtcaggagcgtggactgcaaggaccagacggtt
tgcgtttcatggttcaaggcggggatgtgccctgacgaggctagggaggtcgagtgcatt
gataccatgagcgcatatgatctcaaactgaaccactcacctcactacggagatattgtt
gtccgccttctacagtcagactcaacggacgatggtggtagtgcggcattagatggccaa
aagaagaagaatgcggatgatgctgacctttcgtgggttgggcatgttgttgaccttcct
gatggacacgtccaagtcaagtggggtgatggcagtatgtcaatggtaatgccacacgag
gtcgttgccgtcaccgaggagaactacatagatctacggactgaaatgggtgattgggtg
gaggacgacgatatggatgatgcacctgaagaggctgccaacacggacaataatgatccg
cacaagccaacaaactattgcggtgttgaaaatgaggacctagctgcgatgacaacaaac
cttttcggttttgcaatccggtctttcctccaattcaccagcgacctggtggctcgtggt
aagggatacctgatcaatcaccaaccgccgccgtcatccttgctaccaagctcagaggta
cctggtggtgaagcaatggagaacatcgttgttgaatgtgacgaaatgttcagcttccca
cgtttcgatgtattgcagatcaccccccaggatcaccattaccttgacgacgcaaaccag
ggcggtagtcgtgggaagaactgggccaaggtagtgcaaaaggaatggaaaaatctagag
aacgacttaccagaaaccatctacacacgagtgttcgaagaccgcatggacctgctccgg
gtggtaatggtgggtgcgagcgggacaccgtaccatcacggactcttcttctttgacttg
cagataccatcctcctacccgactgagccaccccaagtgtattaccactcctacggtcta
cgcctcaatccaaacctctacgagtctggtaccgtgtgcctcagtctactaaatacgttc
gatggtgagggcaccgagctctggtcgtcggtgacatcaagcctcctccaagttgttgtc
tccatccaaggcctcgtcctcaacgaccaaccatactacaacgaggccggatatgagacc
ctagtcggcaaaccagagggtcgtcgcaatgcgctgccctacagtgagaatgcttacctt
ctcagccttcggaccatgctccatgtgttgcgccggccgcctcggggatttgaggaattc
gttaaggaccacttccgccggcatggaaggtttgtgctcatgacatgtgatgcggccctg
caaggatgcgtcgtcggtgatgcccatgccaccgaagcgactaaggaacagccatgctcg
gccgggttaaagcttgcgctcgccaacatgttgcctatcctcgtggcagctttcacagag
atcggcgcccaggggtgcgaagagtttcagaaggcatatgctctcagcaccgctcactag
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