Lolium rigidum (rigid ryegrass): 124671417
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Entry
124671417 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124671417
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124671417
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
124671417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf-C3H2C3
Prok-RING_1
RINGv
Motif
Other DBs
NCBI-GeneID:
124671417
NCBI-ProteinID:
XP_047063746
LinkDB
All DBs
Position
7:59537258..59538541
Genome browser
AA seq
348 aa
AA seq
DB search
MASLFPSPPPPYTDAADPAAPPSHSDANTSLLTSLLIIAGLLAFVVVACVSIHALLRYLS
RSSPSSTLPRTHRGQAHAGAREDNREEGEEKRRRRLIESLPRFTMASALAALPKSSPDCA
VCLSPFTPDAELRLLPACRHAFHAACVDAWLRTSPTCPLCRASIALPHPSISAILAAEQP
PPPEPRRISRDRFRVEMGSVSSRGSPISVGSGGGDSRTYSLGSFEYHIEEEVEAVVSRMV
RAVARAPDTIKEEKPAAARSPSPSPPGEAVAEAAGSPTRSWLREYMDRLASSASSFALPG
LWSSRWSQRNEEPWLWDTEAAATPPPPPPGYDEDETAFMVLYRWIAAV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccttttcccgtctccaccgccaccgtacaccgacgccgccgaccccgccgct
cccccgtctcactctgacgccaacacttccttgctcacttccctcctcatcatcgccggc
ctcctcgccttcgtcgtcgtcgcctgcgtctccatccacgcgctcctccggtacctctcc
cgctcgtctccctcgtcgacgctcccgcggacgcaccggggccaggcgcatgccggggca
cgggaggataacagggaggaaggcgaggagaagcggcggcggcggctgatcgagtcgctg
ccccggttcacgatggcgtcggcgctggcggcgctgccgaagagctctccggactgcgcc
gtgtgcctctcgccgttcacgccggacgccgagctgcggctgctccccgcgtgccggcac
gcgttccacgccgcctgcgtggacgcgtggctccgcacctccccgacctgtccgctctgc
cgcgccagcatcgcgctcccgcacccttccatctccgccatcctcgccgccgaacagccg
ccgccacctgaacctcgaagaattagcagggaccgtttccgcgtcgagatgggcagcgtc
agcagccgcggctcgcccatcagtgtcggcagcggcgggggtgacagccgcacctactcg
ctcggctccttcgagtaccacatcgaggaggaggtggaggccgtggtgtcccggatggtg
cgcgccgtggccagggcgcccgacaccatcaaggaggagaagcctgcggccgcgaggtcg
ccgtcgccgtcgccacccggcgaggcggtggctgaagcggcaggatcgcccacgcgtagc
tggctgcgggagtacatggatcgcctggcatcctcggcatcgtctttcgccttgcccgga
ctgtggagctcccggtggagccagagaaacgaggagccgtggctgtgggacacggaggcg
gcagcaacgccaccgccaccgccgccggggtatgacgaggacgagacggcgttcatggtg
ctgtaccggtggatcgccgccgtctga
DBGET
integrated database retrieval system
