Lolium rigidum (rigid ryegrass): 124671441
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Entry
124671441 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124671441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124671441
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124671441
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
YflT
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
124671441
NCBI-ProteinID:
XP_047063801
LinkDB
All DBs
Position
1:128852243..128856540
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AA seq
317 aa
AA seq
DB search
MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLHPLFDRYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRVIEEVEKSGDRSRSR
SPRARHRDGRRDRDHKRRSRSRSRERHGRDRDRDRRRHSRSPSRSLSPDYKNRRRTRDDH
KRRSKSRSRSRSGSYHSASPTRRGASPRKSPAPRRSPTPHSRSPAPRSRSPAPRSRSPAP
RSRSPKQRSRSPAPHSRSPKSRNRSLTPHSRSPTPPKSPLDESSRKQTNGKGSPPSRSVS
LSPRRASSRSPGSDGKE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggaggtcgggcccgccggacatccgcgacaccttctcgctcctcgtc
ctcaacatcagcttccgaacaacggctgacgacctacacccgctcttcgaccgctacggc
aaggtcgtggacgtcttcattccgcgggatcggaggactggggactctaggggtttcgcc
ttcgtgcggtacaagtacgctgatgaggctcagaaggctgtagatcggcttgatgggcgt
aatgtggatggcaggaacatcatggtgcagtttgccaagtatggccctaatgcggagcca
atccgtaaaggaagggtcattgaggaagttgagaaatctggtgacaggtcaagaagccgt
agccctagggcaaggcacagagatggccgtagagacagggatcataagaggcgtagtcgc
agcaggagcagagaaaggcatgggcgtgatagggatagagatcgtcgtcgtcacagccga
agcccaagccggagtttaagccctgactataaaaaccgtcgtagaacaagggatgatcat
aagcgcaggagcaagagcaggagcagaagtcgaagcggctcataccatagtgcttcacct
actcgccgcggtgctagtcctcgcaagagcccagcacctcgcaggagcccaactccacac
agcagaagcccagcaccacgcagcaggagcccagcaccacgcagcaggagcccagcacca
cgcagcaggagcccaaaacaacgcagcaggagcccagcaccacacagcaggagcccaaaa
tcacgcaacaggagcctaacaccacatagcaggagtccaacaccacccaagagcccctta
gatgaaagttccagaaagcagacaaatggaaaaggttcacctccctcacgcagtgtttca
ctatcaccacggcgtgctagctctcgtagcccaggcagcgatggcaaggagtga
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