Lolium rigidum (rigid ryegrass): 124671463
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Entry
124671463 CDS
T09103
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124671463
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124671463
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124671463
NCBI-ProteinID:
XP_047063790
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All DBs
Position
1:39047577..39048902
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AA seq
441 aa
AA seq
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MARSPLHVLLYVLATVAVAAAAAAETAVHKPPPTTNVTSDEEYWAKRAEEARAYSRAAYV
ADPVAELNRFNQDVQRATARRSLARYRGPCLATNPIDRCWRCRSNWASDRQRLATCARGF
GHSAMGGAGGRTYVVTDPSDDELIIPKKGTLRYGVIQDRALWIVFARSMVIKLSQELIVN
SNKTIDGRGAQVHITGAQITLQGVKHVIIHGVRIHHSVPHSGGMIRDSKHHYGHRTRSDG
DGISILSSSNIWIDHVSMWSCADGLIDVVSGSTAITVSNSHFTKHDHVMLFGASNSETQD
AMMQITVAFNHFGKGLVQRMPRCRFGFFHVVNNDYTHWQMYAIGGNRDPTIISQGNRFIA
PDDGNAKEVTKREYAPYSEYKDWVWKSQGDVMMNGAFFNESGGQNERRYGQMDFIPAKNG
KYVGKLTQFAGTLGCRVGKPC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggagccccctccacgttctgctgtacgtcctcgccacggtggccgtggccgcg
gccgcggcagcggaaacggcggtgcacaagccgccgccgaccaccaacgtcacctccgac
gaggagtactgggcgaagcgcgccgaggaggcccgcgcgtacagccgcgccgcgtacgtc
gccgatcccgtcgccgaactcaaccgcttcaaccaggacgtgcagcgcgccacggcgcgc
cgttccctcgcccgttaccgcggcccctgcctggccaccaaccccatcgaccggtgctgg
cgctgccgctccaactgggccagcgaccgccagcgcctcgccacctgcgcccgcggcttc
ggccacagcgccatgggcggcgccggcggcaggacgtacgtggtgaccgatcccagcgac
gacgagctcatcatccccaagaagggcacgctccggtacggcgtgatccaggaccgcgcc
ctgtggatcgtcttcgcacgctccatggtgatcaagctctcccaggagctcatcgtgaac
agcaacaagaccatcgacgggcggggcgcgcaggtgcacatcacgggcgcgcagatcacg
ctgcagggggtgaagcacgtgatcatccacggcgtgcgcatccaccactccgtcccgcac
tccggcggcatgatccgcgactccaagcaccactacgggcaccgcacgcgcagcgacggc
gacgggatctccatcctctcctccagcaacatctggatcgaccacgtctccatgtggagc
tgcgcggacgggctgatcgacgtggtgagcggctccaccgccatcaccgtgtccaacagc
cacttcaccaagcacgaccacgtgatgctcttcggcgccagcaactcggagacccaggac
gccatgatgcagatcacggtggcgttcaaccacttcggcaaggggctggtgcagcggatg
cccaggtgcaggttcggcttcttccacgtggtgaacaacgactacacgcactggcagatg
tacgccatcggcggcaaccgggaccccaccatcatcagccaggggaaccgcttcatcgcg
cccgacgacggcaacgccaaggaggtgaccaagcgggagtacgcgccctacagcgagtac
aaggactgggtgtggaagtcgcagggggacgtcatgatgaatggggccttcttcaacgag
tccggcggccagaacgagcgcaggtacggccagatggacttcattccggccaagaacggc
aagtatgtcggaaagctcacgcagttcgccggcacgctaggatgccgcgtcggcaagccg
tgctga
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