Lolium rigidum (rigid ryegrass): 124671586
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Entry
124671586 CDS
T09103
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124671586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124671586
04121 Ubiquitin system [BR:
lrd04121
]
124671586
03036 Chromosome and associated proteins [BR:
lrd03036
]
124671586
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124671586
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124671586
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
124671586
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124671586
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124671586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_3
zf-HC5HC2H_2
zf-RING_UBOX
RTT107_BRCT_5
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_10
PTCB-BRCT
PHD_NSD
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
124671586
NCBI-ProteinID:
XP_047063900
LinkDB
All DBs
Position
7:complement(79922287..79928245)
Genome browser
AA seq
725 aa
AA seq
DB search
MAKSRPAPAAPPRPRSRPPRTGRPARTAAPAAGRRPPARHGSAASPATPRHGSAASSPAP
AAPATPGPARHALPPLATARPPRPAAATAREAECSVLGKKGLLSSCAEEMASSMRRFLNP
LVLNIQKMELELTCPVCLKLLSAPTMLPCSHTSCSTCATTQTMDGYSCAICKIPYQSQDL
RPAYNLEAIVKIHRSLSSTLSSMVAQQGTQGDIPVALQPTPEPGNKNSYNSVASKLLYSQ
SAGPANAIVGGQKATDPASNQANGVAVQPTVLVHKGPCRSSQSSDGTRDLDCDSNDLEGE
LVASRSPPQNESKRVPDVTDDHTREPKRLKSTDQSEKQRTMTDSWKCEFCHSPEISKCAG
PLLHYLNGEPVKDDQAWKSNVLHVHEKCTEWAPQAFFDGDIVKNLENELARSSKIKCSVC
GLKGAALGCLVRSCRQSFHFPCAHGIPGCRWDEEKFVMLCPSHSSKKLPCEKPKSKKKAQ
LQQSSSDAILGDLNSPFPMERNELWTASPFLANEWVICGSALSGRDKEVLGQFQAQTGIT
VTNNWTPNVTHVVANTDEKGACGRTLKVLLAILAGKWVLNVNWLKACLEAREPVPEEPYE
ISSDVHGSVDGPRTGRLRAIQKAPRLFSGLAFYFIGDVLPMFMADLESLIAMAGGSILDK
ADLSSTSLILYNMEVPPGDDQANIELVMEKRRAEAEELAATVGCRALAHTWVLDSIAFCK
VEFPM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatcgcgtcccgctccggccgccccgccccgccctcgctctcggccgccccgc
accggccgccccgcccgcaccgccgcccccgccgccggccgccggccgcccgcccgccat
ggctcggccgcctcgcccgccacgcctcgccacggctcggccgcctcgtctcccgctccg
gccgcccccgcgacgcccggccccgcccgccacgccctgcccccgctcgccacggcccgg
ccaccccgccccgccgccgccacggctagagaggcagagtgctcggtgctggggaagaag
gggctgttgtcgtcgtgcgcggaggagatggcgagcagcatgaggaggttcctcaacccg
ctggtgctcaacatccagaagatggagctcgagctcacctgccccgtctgcctgaagttg
ctcagcgcgcccacgatgctaccatgctcccacacatcctgcagcacatgtgcgacgaca
cagaccatggatggctacagctgcgcaatttgcaaaataccctaccaatctcaagattta
aggcctgcttataacctggaggcaatagtgaaaatccataggagcctcagctctacgctc
agcagcatggtcgcacagcaggggactcaaggggacattcctgttgcattgcaaccaact
ccagaaccagggaacaaaaattcttacaactctgttgcttcaaagctgctatatagccaa
tcagctggacctgcaaatgcaattgtgggcggtcagaaagcaacggatcctgcatcgaac
caagctaatggggtggccgttcagccaacggttcttgtacacaagggaccatgcaggtcg
tctcaatcttccgatggcactagggatctggactgtgacagtaatgacctggaaggagag
ttggtagcaagcagatcccctcctcaaaatgagtcgaaaagagtacctgatgtaacagat
gaccataccagggaaccaaagaggctaaagtccacagatcagagtgaaaaacaacgaact
atgactgactcctggaaatgtgaattttgtcactctcctgaaatcagcaagtgtgctggc
ccgttgttgcactatctgaatggagaaccagtgaaggatgatcaagcttggaaatctaat
gttctgcatgtccatgagaaatgcactgaatgggctcctcaagcattctttgatggtgat
attgtgaagaatttggagaatgagttggcgcgttcttcgaagatcaagtgcagtgtttgt
ggattaaaaggtgcagcactaggctgccttgttaggagctgccgccaaagctttcatttc
ccatgtgcccatgggatcccaggctgccgatgggacgaagaaaagtttgttatgctgtgt
ccttcccattcatcaaagaagctgccctgtgagaaaccaaaatcgaaaaagaaggcccag
cttcaacaatcatcttctgatgctattcttggcgatttgaactcaccttttccaatggaa
agaaatgaactttggacagcctcaccttttttagcaaatgaatgggtgatatgcggatct
gccctctctggccgagacaaggaagtgttgggtcagttccaggctcaaactggcatcaca
gtaactaataactggacgccaaatgtgactcatgtagtcgctaatacggatgaaaagggt
gcatgtggtaggacactgaaggttctcctggccatactagctgggaaatgggttctcaat
gtaaattggctgaaagcttgcctggaggctagagaaccagtccctgaggagccatatgag
atcagttctgatgttcatggctctgttgatggccctcgcacaggaagactacgagcaatc
caaaaggcaccaagactgttttcagggctggccttctactttattggtgatgtcctgccg
atgtttatggcggaccttgaaagcttgattgccatggcaggaggatctatcttggacaag
gctgatctctccagcacatccttgattctttacaacatggaggttcctcctggagatgat
caggccaacatcgagctggttatggagaagagaagggcggaggctgaagaactggcagca
acagttggctgcagggctcttgctcatacatgggttctggatagcattgccttctgcaaa
gtggagtttcccatgtga
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