Lolium rigidum (rigid ryegrass): 124671710
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Entry
124671710 CDS
T09103
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
124671710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrd04040
]
124671710
Ion channels [BR:
lrd04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124671710
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
124671710
NCBI-ProteinID:
XP_047064009
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Position
1:41432954..41442687
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AA seq
673 aa
AA seq
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MELQRFPIGRAPLCIPVRDNTSEDPFRCITAPVIVQRDAPPVSTGQAPKHQKLMISGSLG
QCDDADCLDCPKNKMHLKRRPALFDDKDGGWMRRIWSSFPYIPVMNPHSKAVRRWNQFFA
ISCLIAIFIDPLFFFLLSMDKDNKCIVFNWQFGEALIAARTLTDAVYFLHMLLQFRMAYI
DPESRVVGSGDLVDEPGKIFIHYLRSAFIVDFFVLLPLPQVIVMRVIPKYVGLSSANYVK
NLLRATVILQYAPRICRFVPLLGGQSANGFIFESAWANFVINLLIFVLAGHVVGSCWYHF
GLQNVNQCLQNACVALNITSCAEFTDCGYGISEHVREKRHHWFSHSMTQGCFDTTSGSYK
YGIYEQVVLLTAEPAINRYVYSLFWGFQQISTLAGNLVPSYFVWEVLFTKAIIALGLLLF
ALLIGNMQNFLQSLGKRRLDMQLRRHDVEQWMGHRQLPEDLRRRVRQAERFSWVATRGVN
EEEILSNLPEDIQRDIQHHFFRFLDKFRLFTVKDCPIWDAICHKLKHKLYITGSDIICQG
RPVEKVVFIVRGKLESIGEDGSKFQLHKGAVCGEELLMWYLEQPSVNRDAGEVAVDPVRW
MSIRTIRCLTNVEAFVLQGSDLEEVTSEFSRFLCNPSVIAAIRYESPRTLAASRIQIAWR
HRQRRRRAEAVQG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagttgcagagatttcctatcggaagggcaccgctgtgtataccagtcagagataat
acatctgaagaccccttcagatgcattactgctcctgtgatcgttcagagggatgctcct
cctgtgtccactgggcaggctcccaagcaccaaaagctgatgatttctggatcactgggg
caatgtgatgatgctgattgcttagattgtccaaagaacaaaatgcatctcaaaagaagg
ccagctctctttgatgataaggatggtggatggatgaggagaatttggtcgtcctttcca
tacattccagttatgaacccacattctaaggctgttcgtcgatggaatcagttttttgct
atatcatgcttaattgccattttcatcgacccgctctttttcttcctactgtccatggat
aaggataacaagtgcatagtattcaactggcagtttggggaagcattaattgccgcaaga
actttgacagatgcagtttattttcttcacatgctactccagttcaggatggcctacata
gatccggagtcaagagtagttgggtctggagatttagttgatgagcctggcaaaattttt
atccactatcttcgcagtgctttcatagtcgacttttttgttttgcttccactccctcag
gtgattgtaatgagagttatccctaagtatgttgggttatccagtgcaaactacgtgaag
aatttgttgcgtgccacagttattcttcagtatgccccacgaatctgcagatttgtgcca
ttgcttggtggccaatctgctaatggattcatttttgaatccgcatgggctaactttgtg
attaatcttctaatatttgttttggctgggcatgttgttggttcatgttggtaccacttt
gggctacagaacgttaatcagtgtctacagaatgcttgtgttgcactgaatataacatcc
tgtgccgagttcacagattgtggatatggcattagtgaacatgttagagaaaagaggcac
cactggttcagccactcaatgacacaaggctgttttgatactacaagtggttcttataag
tatgggatctatgagcaagttgtgctgctaactgcagaacccgccattaaccgttatgtg
tattcattattttgggggtttcagcaaataagtactttagctggcaatttggtcccaagt
tacttcgtatgggaggttctgttcaccaaggctattattgcactggggttgttgcttttt
gcattacttattgggaacatgcagaactttctacaatctcttgggaaaaggagactggac
atgcaacttaggaggcatgatgttgaacaatggatgggacacaggcaactcccagaagat
ttgagaaggagggttagacaagcagaaagattcagttgggtggctacgagaggagtgaat
gaagaagagatattgagtaatttaccagaagatattcaaagggatatacagcaccatttc
ttcaggttccttgacaagtttcgcttattcactgtcaaggactgtccaatctgggatgct
atctgtcacaagttaaagcataagttgtacattactggaagcgacattatttgccagggc
cgtccagttgaaaaggtggtctttatagttcggggaaaattagaaagcatcggtgaagat
ggtagcaagtttcaattacataaaggagctgtgtgtggggaggaactccttatgtggtac
ttggagcagccgtcagtgaatagagatgctggggaggtggcggtcgatcccgttcgttgg
atgtcgatacgtaccatcagatgtttaacaaatgtagaagctttcgtactacagggaagt
gatctggaagaagttacatcagagttttcaaggttcttgtgtaatccgtctgtgattgct
gcaattaggtacgagtcaccgaggaccctcgcggcaagccgcattcaaatcgcatggagg
caccggcaaaggagacggagagctgaggccgtgcaaggctaa
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