Lolium rigidum (rigid ryegrass): 124672391
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Entry
124672391 CDS
T09103
Name
(RefSeq) serine/threonine-protein phosphatase alpha-2 isoform-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124672391
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124672391
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124672391
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124672391
03041 Spliceosome [BR:
lrd03041
]
124672391
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124672391
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
124672391
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124672391
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124672391
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124672391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
124672391
NCBI-ProteinID:
XP_047064584
LinkDB
All DBs
Position
7:189031229..189032536
Genome browser
AA seq
349 aa
AA seq
DB search
MDIDDIIQRLLDAEHSSPEDHPPLSNAEIKLLCAAATKVLLSQPTLLRLDAPINISGDIH
GQYSDLLRIFRATGFPSDANRYLFLGDYVDRGSRSIETICLLLAYKVKYPDAFFLIRGNH
ECSSVNRSYGFLDECERRGLEKDKLWNTINGCFDCLPLAALVGNKIGKKIFCVHGGLSPE
LESMDQIRRVKRPLPVPDEGLVCDLLWSDPDAADEWGWGESTRGRSVTFGSDLVEEFVEK
NGLAMVCRAHEVKQGGYEWFADRKLVTVFSAPNYAGQCDNAGAVMTVDRNLTCSFHIIEP
ADKILFHFTSMSDVCLQLNCYWSTLLQHMDLKYIREEQTQHVCAGFGLR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgacgacatcatccagcgcctcctcgacgccgagcacagctcgccggaagac
catccgccgctctccaacgccgagatcaagctcctctgcgccgccgccacgaaggtcctc
ctttcccagcccacgctcctgcgcctcgacgcccccatcaacatctccggtgacatccac
gggcagtactccgaccttcttcgcatattccgtgcgaccgggttcccgtcggacgccaac
cgctaccttttcctcggcgactacgtcgaccgcggtagccgcagcatcgagaccatctgc
ctcctcctcgcctacaaggtcaagtaccccgacgccttcttcctcatccggggaaaccac
gagtgctcctccgtcaaccgctcctacggcttcctggacgagtgcgagagacgaggcctg
gagaaggacaagctctggaataccatcaacggctgcttcgactgcctaccgctggcggcg
ctcgtcggaaacaagatcggcaagaaaatcttctgcgtgcacggcggcctgtcgccggag
ctggagagcatggaccagatacgccgagtcaaacgcccactgccggtccccgacgagggc
ctcgtgtgcgaccttctctggtcggaccccgacgccgccgacgagtgggggtggggcgag
tcgaccaggggcaggtccgtcacgttcgggtccgacttggtggaggagttcgtggagaag
aacgggctggccatggtgtgcagggcgcacgaggtgaagcagggcggctacgagtggttc
gcggacaggaagctcgtcaccgtcttctccgcgcccaactacgccggccaatgcgacaac
gccggcgcggtcatgaccgtggacagaaatctcacctgctccttccacatcatcgagcca
gcagacaagatattatttcactttactagtatgagtgatgtttgtctccaattgaactgc
tattggtcgaccttgttacaacacatggatctgaagtacattcgcgaggaacaaacacaa
cacgtgtgtgcgggcttcggtctgcgataa
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