Lolium rigidum (rigid ryegrass): 124672465
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Entry
124672465 CDS
T09103
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124672465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124672465
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
124672465
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
RAG1_imp_bd
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124672465
NCBI-ProteinID:
XP_047064643
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All DBs
Position
7:complement(204747215..204751806)
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AA seq
940 aa
AA seq
DB search
SVGLYYRRKIKASDPVSGLSLPTANTGRSLGCGSVTKDSGSSYARKVQVMNIISTLCDPT
PNYLASAETKLINGSIEQTEQKKEVIIILDSDDEDESTAGYQQLTPEKKQQLTPEKSKQL
IQSEWTGTLTTCATTKGIDEVIETTLGRDQNSRIAPYGQSAALMTRYPWSSYQPSAHFER
VILHERPEEERKQDLAAASYAERIAETKKNLSLPKEREQRKLDLSSHVDGNAETVPRKRK
NEGKNEANPAVLDLPSETYSSVEEDEPMEEEDKPERESDGLEDFWNDFSLAIESSKLDTL
EEVASEKEVTKQEVDTDCNHDIRIHEDLGHVCRVCGMIVRRADTIIDYQWKKASRSRSYF
CETRSKDADEIAIGDVRVAEELTVLDIAIHPRHAKHMRPHQLAGFHFLVKNLVSEKPGGC
ILAHAPGSGKTFMLISFIQSFLAKYPSARPLVILPKGILGTWKREFQRWQVEDIPLYDFY
SVKADKRADQLEILNSWQAKMSVLFLGYTQFSQIICSDGGGTVAAACRNMLLMVPNLLIM
DEGHTPRNRETNVLESLSRVQTPRKVILSGTLFQNHVREVFNILNLVRPQFLKMERSRPI
VRRIMCQVAMSGSRISKAVAGNVFTESVEETLLNDDNFVRKAHVIRSLRELTKDVLHYYK
GDILEELPGLVDFSVFLKLSPKQKQIVHKLEAYENFKGSAVGAALYMHPCLSEISEVAAA
DRSINSTDATIDSLVQYINVTDGVKARFFTNILVLANSAGEKVLAFGQYILPMKFLERLL
VKTKGWHVGKEIFVISGDTSPEERDLAMEQFNNSADAKVLFGSIKACGEGISLVGASRVV
ILDVHLNPSVTRQAIGRAFRPGQHKKVFVYRLVAADSLEENFHETAFKKEVIPKLWFEWS
EQHCTSEEGFKLNNVDIDNCEDELLDNKTMRQDIKALYRR
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
tctgtaggcttgtattaccgcagaaaaatcaaggcttctgaccccgtcagtggtctttca
cttcctactgcgaatacgggtcgcagtttgggatgtggcagtgttaccaaggactctgga
agttcgtatgctcggaaggtccaagtgatgaatatcatttctactctgtgtgatcccact
ccgaattacctagcgagtgctgaaactaagttgatcaacggctctatcgagcaaactgaa
cagaagaaggaagtaataataattcttgattcggatgatgaagatgaaagcacagcagga
taccaacagttgacacctgagaaaaaacaacagttgacacctgagaaaagcaaacaactg
atacaatcagaatggactggtactctcaccacatgtgcgacaacaaaaggaattgacgaa
gtaattgaaaccacacttggtcgagaccaaaacagtcgaattgctccatatggtcaaagt
gcagctttaatgactcggtatccttggtccagctatcaaccatcagctcattttgagaga
gttatattgcacgaaagacctgaagaggaacgtaaacaagatctggctgctgctagctat
gcagagaggatagcagaaacaaaaaaaaatctttctcttcctaaggagagagaacaacgg
aaattggacctaagctcccacgtagatggaaatgctgaaactgtgccaagaaaacgaaaa
aatgaaggaaaaaatgaagcaaatccagcagtacttgatttgccttcagaaacttacagc
tctgtggaggaggatgagcccatggaggaagaggataaaccagaaagggaaagtgatggt
ctggaggatttttggaacgacttctcactggctatcgaaagctctaagcttgacacactt
gaagaggtagccagtgagaaagaagtgactaaacaagaggtggacaccgactgcaatcat
gacatacggattcatgaagatctgggccatgtatgtcgtgtctgcggtatgattgtgagg
agggctgacacaatcattgattatcagtggaaaaaggcatcaaggtcaagatcatatttc
tgtgaaacgcgttcgaaggatgctgatgagatagccattggtgatgttagagtcgctgaa
gaactcactgtgttagacattgccatccatccaaggcatgcaaagcacatgagaccacat
cagttggcaggtttccactttctggttaagaatttagtctctgagaaaccaggaggttgc
atcctagctcatgcccctggttcggggaaaacatttatgctgataagtttcattcagagc
ttcctcgcaaagtatccttctgcaaggccccttgttatacttcctaaaggcatattaggt
acatggaagagggaatttcaacggtggcaagtggaggacataccactgtatgatttctat
tctgtcaaggctgacaagagagcagaccagttggaaatcctcaactcttggcaagccaaa
atgagcgtcctatttcttggatacacgcagttctcgcagataatttgtagtgatgggggt
ggcaccgttgcagctgcatgccggaacatgttgcttatggtccctaacctactgataatg
gatgagggtcacacacctaggaatcgggagactaatgtgctagaatccctgagcagagta
caaactccccgtaaggtgatcctatctggtacactttttcagaatcatgtcagagaagtg
ttcaacatcttgaaccttgtacggccacagtttctcaagatggaacgttctcgtccgatc
gttagacgtataatgtgtcaagtggcaatgtcaggtagcaggatttcaaaagcggttgct
ggcaatgtattcactgagtcagtagaagagaccctgctgaatgatgataactttgtgaga
aaagcacacgtcattagaagtctcagagaactaaccaaagacgtgcttcactactataag
ggtgacatcttagaagaactacctggcctagtagacttcagtgtcttcctgaaactcagt
cccaagcagaaacaaatcgttcataagttggaagcctatgaaaatttcaaaggaagcgca
gtcggagctgcactgtacatgcatccttgtctgtcagaaatttcagaagttgctgctgca
gataggtctatcaactcgacggatgccacaattgatagtttggtccagtatatcaatgtg
acagacggtgtgaaggcgagatttttcactaacatcctggtgcttgcgaattctgcagga
gagaaggtgcttgcttttggtcagtatatacttcccatgaagtttttggaaaggctattg
gtgaagacaaagggctggcatgtaggcaaggagatctttgtgatctctggtgatactagt
ccagaagagagagatctggcgatggagcagtttaacaactctgctgatgcaaaagttctg
tttggttctatcaaggcatgtggggagggtatctcccttgtgggcgcatcaagagttgtg
attttagatgttcacttgaacccgtctgttacccgtcaagcaattgggcgagccttcagg
cctggacagcacaagaaagtgtttgtgtacaggcttgtagctgctgattctctagaggaa
aatttccatgaaactgcattcaagaaagaagtcataccaaagctgtggtttgaatggagt
gagcagcactgcacgtccgaagaaggctttaaactgaacaatgttgatattgataactgt
gaggacgagttgctggacaacaaaactatgcgccaggatatcaaggctttgtatagaagg
tga
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