KEGG   Lolium rigidum (rigid ryegrass): 124672564
Entry
124672564         CDS       T09103                                 
Name
(RefSeq) GTP-binding protein YPTM2-like
  KO
K07874  Ras-related protein Rab-1A
Organism
lrd  Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lrd04131]
    124672564
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lrd04147]
    124672564
   04031 GTP-binding proteins [BR:lrd04031]
    124672564
Membrane trafficking [BR:lrd04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    124672564
 Autophagy
  Other autophagy associated proteins
    124672564
Exosome [BR:lrd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124672564
  Exosomal proteins of other body fluids (saliva and urine)
   124672564
  Exosomal proteins of colorectal cancer cells
   124672564
GTP-binding proteins [BR:lrd04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    124672564
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB LANC_like AAA_29 FeoB_N AAA_16 AAA_22 ABC_tran AAA_5 TniB
Other DBs
NCBI-GeneID: 124672564
NCBI-ProteinID: XP_047064729
LinkDB
Position
7:complement(236932579..236936239)
AA seq 249 aa
PSDSGRPRRSLPRSSQPPSPVPVPSRSELLPREIGARPPREDPDLAMNPEYDYLFKLLLI
GDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDTAGQERFRTIT
SSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTDKKVVSYE
TAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNARPATVQIHGKPV
EQKTSCCSS
NT seq 750 nt   +upstreamnt  +downstreamnt
ccgtcagattcgggcaggccgcggaggagtctacctcgttcttcccagcctccaagcccc
gtccccgtcccgtcccgaagcgaattgcttccccgcgagattggagcacgcccgccacgg
gaggatcccgatctcgccatgaatcccgagtatgactatctctttaagcttttgcttatc
ggagactcaggtgttggcaagtcgtgccttctcttaagatttgctgatgactcgtacctg
gagagttatatcagtactattggtgttgatttcaaaatacgtactgtggagcaagatgga
aagactatgaagctgcaaatctgggacactgctgggcaagaacggttcagaactattact
agcagctactatcgaggggctcatggtatcattattgtctatgatgtgacagatcaggat
agtttcaacaatgtcaagcagtggttgaacgagattgatcgctatgctagtgataatgtg
aacaagcttcttgtagggaacaaatgtgatctcaccgataaaaaagttgtatcatatgag
acagcgaaggcattcgctgatgagattggcatcccattcatggagaccagtgcaaagaat
gccttgaatgtcgagcaagctttcatggctatgtctgcttcaatcaaggacaggatggcg
agccagccagccgcaaacaacgcacgcccagctacggtgcagattcacgggaaacctgtt
gaacagaagacaagctgctgctcttcttag

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