Lolium rigidum (rigid ryegrass): 124672673
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Entry
124672673 CDS
T09103
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124672673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124672673
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124672673
03012 Translation factors [BR:
lrd03012
]
124672673
04131 Membrane trafficking [BR:
lrd04131
]
124672673
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124672673
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124672673
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124672673
Translation factors [BR:
lrd03012
]
Eukaryotic type
Elongation factors
124672673
Membrane trafficking [BR:
lrd04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
124672673
Exosome [BR:
lrd04147
]
Exosomal proteins
Proteins found in most exosomes
124672673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
SRPRB
FlpD
WH_Rok
AAA_22
DUF34_NIF3
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
124672673
NCBI-ProteinID:
XP_047064821
LinkDB
All DBs
Position
7:48727824..48731000
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYSCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYEEIVKEVSSYLKK
VGYNPDKVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGQLVTFGPTGLTTEVKSVEMHHESMLEAGPGDNVGFNV
KNVAVKDIKRGYVASNAKDDPAKEAASFVAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEIQTKVDRRSGKEIEAFPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagattcacatcagcattgtggtcattggccacgtcgactctggcaag
tcgacgaccactggtcacctgatctacaagcttggaggcattgacaagcgtgtgatcgag
aggttcgagaaggaagctgctgagatgaacaagaggtccttcaagtacgcgtgggtgctt
gacaagctcaaggccgagcgtgagaggggtatcaccatcgatatcgccctgtggaagttt
gagaccaccaagtactcctgcaccgtcattgatgctcctggtcaccgtgacttcatcaag
aacatgatcactggaacctcccaggctgattgtgctgtgcttatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcacgctctccttgct
ttcacccttggggtgaagcagatgatctgctgctgcaacaagatggatgccaccactccc
aagtactccaagggcaggtatgaagaaatcgtgaaggaagtctcctcatacctgaagaag
gtcggctataaccctgacaaggtcccatttgttcccatctctgggttcgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggccccaccctccttgaggctctt
gaccagatcaatgagcccaagaggccctcggacaagcccctgcgtcttcccctccaggac
gtttacaagattggtggcattggaactgtgccggtggggcgtgttgagacaggtgtgatc
aagcctggccagctcgtcacctttggcccaactgggctgaccactgaggtcaagtctgtg
gagatgcaccacgagtctatgcttgaggctgggccaggtgacaatgttggcttcaacgtc
aagaatgttgctgtgaaggatatcaagcgtgggtatgtggcctccaatgccaaggacgac
cccgccaaggaggctgccagctttgttgcccaggtcatcatcatgaaccaccctggtcag
atcggcaacggctatgccccagtgctggactgccacacctcccacatcgctgtcaagttc
tctgagatccagacaaaggttgacaggcgatctggtaaggagattgaagccttccccaag
ttcctcaagaacggtgatgctggtttcgtgaagatgattcccaccaagcccatggtggtg
gagacctttgcccagtaccctccccttggccgctttgctgtccgggacatgaggcagact
gttgctgttggtgtcatcaagagcgtggagaagaaggaccccactggcgccaaggtgacc
aaggctgctgccaagaagaaatga
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