Lolium rigidum (rigid ryegrass): 124673021
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Entry
124673021 CDS
T09103
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124673021
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124673021
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124673021
NCBI-ProteinID:
XP_047065113
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Position
7:complement(295849097..295854486)
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AA seq
440 aa
AA seq
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MAGEAGPARWRWVALLGAVSVLLLVGVLAGGGSGLATFPGGRLRTDEDADGPTVVAGAVP
DPESVVSQVHMSIRNSTARRNLGGYLSCGTGNPIDDCWRCDPDWHNNRQRLADCGIGFGR
NAIGGRDGKIYVVTDSGDDDPVTPKKGTLRYAVIQDEPLWIIFKRDMVITLKQELIMNSF
KTIDGRGANVHIANGACLTIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGD
AVSIFGSSHVWVDHCSLSNCADGLVDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYLKDK
AMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAP
TNPFAKEVTKRVETAQTTWNGWNWRSEGDLLLNGAFFTPSGAGASASYSRASSLGAKSSS
MVGTITSGAGVLSCHKGSSC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagaagcgggtccggcgagatggaggtgggtggcgctgctcggggccgtctcc
gtgctgctcctcgtcggagtcctcgctggcggcggcagcggcctggcgactttccccggc
gggcggctcaggaccgacgaagacgccgacgggccgacggtggtggccggcgcggtgcct
gacccggaatcggtggtctcgcaggtgcacatgtcgatcaggaacagcaccgcccggagg
aacctggggggttacctgtcgtgcgggacggggaacccaatcgacgactgctggcgctgc
gaccccgactggcacaacaaccggcagcgcctcgccgactgtggcattggcttcggccgc
aacgccattggcggtcgggacggcaagatctacgtggtcactgactccggcgacgatgac
cccgtgaccccgaagaagggcaccctccgctacgccgtcatccaggacgagccgctgtgg
atcatcttcaagcgcgacatggtcatcaccctcaagcaggagctcatcatgaacagcttc
aagaccatcgacgggcgcggcgccaacgtgcacatcgccaatggcgcctgcctcaccatc
cagtatgtcaccaatgtcatcatccacggcttgcacatccacgactgcaggcccactggc
aacgccatggtgcgtagctcgccgagccactacgggtggaggacgatggccgacggcgat
gctgtgtctatcttcgggtccagccatgtctgggtcgaccactgctccctctccaactgc
gccgacggcctcgtcgatgccatcatgggatccactgccatcactgtgtccaacaactac
ttcacccaccacaatgaggtgatgctcctgggtcacagtgactcctatctgaaggacaag
gcaatgcaggtcacaatagctttcaaccattttggagagggactcattcagagaatgcca
aggtgcaggcatggttacttccatgtggtgaacaatgactacacccactgggagatgtac
gccatcggagggagtgctgagccgaccatcaacagccagggaaaccgctacctggcgcca
accaacccttttgccaaggaggtgacaaagagggttgaaactgctcagaccacctggaat
ggctggaactggaggtcggagggcgacctcctgctgaatggtgccttcttcaccccgtcg
ggagctggcgcctcggccagctactcgcgtgcctccagccttggcgccaagtcctcgtcc
atggtaggaaccatcacctccggtgcaggcgtcctctcgtgccacaagggctcctcctgc
tag
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