Lolium rigidum (rigid ryegrass): 124673127
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Entry
124673127 CDS
T09103
Name
(RefSeq) pre-mRNA-splicing factor CWC22-like
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124673127
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124673127
Complex C
U4/U6.U5 tri-SnRNP related factors
124673127
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Motif
Other DBs
NCBI-GeneID:
124673127
NCBI-ProteinID:
XP_047065214
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Position
7:306665291..306666874
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AA seq
527 aa
AA seq
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MARPRPTAKCRSVYVPPPRAAAAADYAAGDKACPAYQRQTWDALRRSITGHVNKATAANI
RHVLPELLAENLVRGRGLLCRALLRSQAACPAFTDVFAAIAAVVNSKIPDVGRLLLVRLV
IRLSRSHATGDKTQLAAAARFVAHLVNQGVAHELLALELLEMLLAEPTDDGVEVAVGFVT
ECGAALSEACPRAVDAVFDRLRSILVDGGVDKRVGFLIEGVFAVRRARFRGHPPVRPELD
LVEQEDQFTHQVEISLQLDPETHLDVFVASGTFLQDEAAYDDLKRSMLGDDGQDEDDNEY
DESEDGDDDDEDTDVTIKDETETNLTGLRRTIYLTIMSSAGAEEAGHKLLSIVRPGHGQE
VELCGMIVECCKQERAPKTRFYGELGQRLCGVGRAYQAGFEACFARCYAAAHRMGTDELR
AAAGFFAQLLAADAVPWGGVLGGVRVTEEDTTSSSRILVKTLFQEMAEQLGVRVLGRRMN
DGDDPVVRDALFPRDSAKNARFAIDFFTAIGLEGVTQPARKLLLSGS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtccgaggccgacagcaaagtgcaggagcgtgtacgtcccgccgcctagggca
gcagcggcggccgactacgccgccggcgacaaggcctgcccagcctaccagcgccagacc
tgggacgcgctgagacgcagcatcaccggccacgtgaacaaggccaccgccgccaacatc
cgccacgtccttccagagctcctcgccgagaacctcgtccgcgggcgcggcctgctctgc
cgcgcgctgctcaggtcgcaggcggcctgcccggccttcaccgacgtgttcgcggcgatc
gctgcggtcgtcaactccaagatcccggacgtcggccggctcctcctggtccgtctcgtg
atccggctcagtcgctcccacgccaccggcgacaagacacagctggcggccgcggcgagg
ttcgtggcccaccttgtgaaccagggcgtggcgcacgagctgctggcgctggagctcctg
gagatgctgctcgccgagcccacggacgatggcgtggaggtggcggtgggcttcgtcacg
gagtgcggcgccgctctgagcgaggcgtgcccccgtgcggtggacgccgtgttcgatcgg
ctccggagcatcctcgtcgacggcggcgtcgacaagcgcgtcgggttcttgatcgagggg
gtgttcgcggtcaggagagctcggttccggggccacccgcctgtccggccggagctggac
ctcgtggagcaggaggatcagttcacgcatcaggtcgagatctcgctccagcttgacccc
gagacccatctcgacgtgttcgtggcaagcggcactttcctccaggacgaggctgcctac
gatgacctcaaacgaagcatgctcggagacgacggccaggacgaggatgacaacgaatat
gacgagtccgaagacggggatgatgatgatgaagacacggatgtgacgatcaaggacgag
acggagacgaacctgacgggcctccggcggacgatctacctgacgatcatgtcgagcgcg
ggcgcggaggaagcgggtcacaagctactgtccatcgtgaggcccggccatggccaggag
gtggagctgtgcggcatgatcgtcgagtgctgcaagcaggagcgggcgcccaagacgcgg
ttctacggcgagctcgggcagcggctgtgcggcgtcggccgggcgtaccaggccggcttc
gaggcgtgcttcgcgcggtgctacgcggcggcgcaccgcatgggcaccgacgagctgcgt
gccgccgcggggttcttcgcgcagctgctggccgccgacgccgtgccgtggggcggcgtg
ctgggcggcgtcagggtcacggaggaggacaccacgtcgtcgtcgcgcatcttggtgaag
acgttgttccaggagatggcggagcagctcggggtgcgggtgctcggccggaggatgaac
gacggcgatgaccccgtggtccgtgacgccctgttcccgagggactctgccaagaacgcg
aggttcgccatagatttcttcacggcgatcggtctcgaaggagtgactcaacctgcgagg
aagctcttgttgtccggtagttag
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