Lolium rigidum (rigid ryegrass): 124673174
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Entry
124673174 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124673174
KO
K08518
syntaxin-binding protein 5
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124673174
Membrane trafficking [BR:
lrd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124673174
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
124673174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_HPS5
Synaptobrevin
Beta-prop_WDR90_POC16_2nd
TFIIIC_delta
Motif
Other DBs
NCBI-GeneID:
124673174
NCBI-ProteinID:
XP_047065256
LinkDB
All DBs
Position
7:complement(313890977..313898720)
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AA seq
1199 aa
AA seq
DB search
MGPLLLLAMLRRWGEDIDNSADSLEICFPREFEWVTDSGRASTLSTRFPSIVAVACFRLL
LTCRCGEPVQSSPAPPKPKPSRSSPMFRKRLLKKVLQQRRNGGGPGGGAGGAGEVAQLDA
QIALHYGVPYAASVMGFDPVQRLLAVGTLDGRIKIFGGDNIEGLLISPKSVPYKYLQFIQ
NQGLLVAVSNENEIQVWNLEFRQLFHFSQWDVNITAFAVIEETFFMYLGDENGLLSVLKY
DVDDGKLLRMPYNVTIHSLSEAAGVSLLDTQPIVGILPQPDTLGTRVLIAFERGLLVLWD
ISEDRAIAVRGYGDLHMKGQVSGAQTDVSEHQIDNVDETEEEREICSLCWASRGGSTVAV
GYITGDILLWDMTVSSRQGKQTDVSSNVVKLQLASGSRRLPVIVLHWSAGSAKDTTKGGH
LFVYGGDDMGSEEVLTVLSLESSNGLELVRCASRGDLKLDGSFADMILIPDTGVPDKIRA
SALFVLTNPGQLNFYDGSALFSGRKSEEVYAQPEARKFPVAVPTIDPNITVTDLYSLTGT
GHPSISLKKFCARQSVAPPISGNMKWPLTGGVPSEMSLKEDHAVERIYVAGYQDGSVRIW
DATFPILVPMFVLDAKVSDIILDGANASVSSLAFCSLTLTFAVGTTSGLVRMYKLHEHTG
DSSFHFVSESKQEVHAVHHGRGFHCHVAFMASNSPVRSLRFTGSGEVLAVGYQNGQVGMF
DASQLSMMFCVDCASGTNSPVVSLSIYGVVSSAAEVDQSQKEIAKSGKNSTDVLLSLTKD
ARLTVIDSTSGLVINSHLLDQKQLSAVSMYVIDVASDEEQSQSSGDKSPPQSQTGKEQKD
LDQKQAQGAETNQKKASQHSHSGDSNSLLLVCFEDEALLFSLTSLIQGSNKHLDKIKLAK
HCCWSAIFKNKDDKACGLILAYQTGIIELRSLPDLEILAESSLMHLLRWSYKTGMDKSMS
SLNGQIAMVNGSEFAIISLIASENDFRIPESLPCLHDKVLAAAAEAASRISTDQKRKQNP
AGVLGGIIKGFKGKADENANLRRSFNAQTHGELLESIFLKESSAEASIPSPDDPIEELTI
DDIDIDDDDVPLSPPPASSSTSHVHKKTTVEDERAKLFEGSSAADKPRMRSTQEILTKYK
FGGDAAAAAAHAKDKLMQRQEKLERISLRTQELQDGAENFASLAQELAKNMENKKWWKL
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctcttcttcttcttgctatgctccggcgatggggagaagatatagacaactcg
gccgacagtttggagatttgcttcccgcgggaattcgagtgggtcacggactcaggaaga
gccagtactctctctacccgctttccatccatagtcgccgtcgcctgttttcgtcttctc
ctcacctgccgctgcggcgaaccagtccagtcgtcgccggcgccgcccaaaccgaagcca
agcagatcgtcgccgatgttcaggaagcgcctcttgaagaaggtgctgcagcagcgaagg
aatggaggaggaccaggagggggagcaggaggagcaggagaggtggcccagctggacgcg
cagatcgcgcttcactacggggtcccctacgccgcctcggtcatggggtttgatccagtg
cagcggctcctcgccgtcgggacgctggatggcaggataaaaatctttggaggtgataac
atcgaaggcctcctcatatcgccaaagagtgtgccatacaagtatttgcagtttatacaa
aaccagggactactggttgcagtttctaacgagaatgaaatccaggtatggaatctcgaa
ttcagacaactatttcatttttcccagtgggacgtcaacataactgcatttgcagtcata
gaggagaccttttttatgtaccttggagatgaaaatggcctgctttctgttctgaagtat
gatgtagatgatgggaagcttctaaggatgccttacaatgttactatacattccttaagt
gaagcagctggtgtttccttgcttgatactcaacctatcgttggaatattgcctcaaccg
gacaccttgggcacgagggtgctaattgcatttgagagaggattgttagttctttgggac
atatcggaggaccgtgcaattgctgttcgcggctatggggacttacacatgaaaggtcaa
gtcagtggcgctcaaacagatgttagtgaacatcaaatagataatgttgatgagactgaa
gaagagagagaaatttgctcactttgttgggcatcaagagggggttcaactgtggctgtt
ggctatataaccggagacatacttctatgggatatgacagtatcctctagacaaggaaag
caaactgatgtttcatccaatgttgtcaagctgcagctggcttctggaagtcgtaggctt
cctgttattgtcttgcactggtctgccgggtcagcaaaagatactactaaaggcggtcat
ctttttgtatacggtggtgatgatatggggtctgaagaagttctgacggttcttagcctg
gaatcatctaatggattagagttagtaagatgcgcgtcgcgtggggacctcaaacttgat
ggatcctttgctgatatgattcttattccagatactggggttccagataaaatacgagct
tctgcactttttgtattgacgaatcctggacaattgaatttctatgatggtagtgctcta
ttttctggacggaaatcagaagaggtatatgctcagcctgaggctcggaaatttccagtt
gcagttcctacaattgatcccaacataaccgtcacggatctgtattcactaactggaaca
gggcatccaagtatttcactgaagaaattttgtgcgaggcaaagtgtcgcacctccgata
tcagggaatatgaaatggcctttgactggtggggttcctagtgaaatgtcactgaaggaa
gatcatgcggttgaaagaatatatgttgcaggctatcaagatggttctgtgagaatatgg
gatgcaacttttcccattctggtgccaatgtttgtattggatgcaaaggtgtctgatatt
attttggatggagcaaatgcttctgtatcatcgctggcgttttgttcattaaccttgact
ttcgctgttggcacaacaagtggtctggtgcgcatgtataaacttcatgagcatactggg
gattctagctttcacttcgtgagtgaatctaaacaggaagttcatgctgttcatcatggg
agaggattccattgtcatgttgcctttatggcatcaaattcccctgtgcgatccctcaga
tttacaggttcaggcgaggtccttgcagtaggatatcaaaatggtcaggtgggcatgttt
gatgcaagtcaactgtcaatgatgttctgtgtggattgcgcatcaggaacaaattctcct
gtggtctcactaagcatctatggtgttgtttcatctgctgcagaagtggaccagtcccag
aaagagattgctaaaagtggaaaaaattccacagatgttctactttccttaactaaggat
gcacgtcttactgtaattgacagcactagcggtctggtaataaattcacatctgttagat
cagaagcaattgtctgcagtttcgatgtatgtcatagatgtagcttcagatgaggagcaa
tcacaatcatcaggagacaaatccccgcctcaaagtcagacaggaaaagaacaaaaggat
cttgaccaaaaacaagcacaaggagccgaaactaaccagaaaaaggcttctcaacattca
cacagcggtgattcaaattctcttcttttggtctgctttgaggatgaagcgcttttattt
tctctgacatcattgattcagggaagcaacaagcatctagataaaataaagctcgcaaaa
cactgctgctggtcagccattttcaagaataaggatgataaagcttgtggactgatatta
gcttatcagacagggatcatagaattgagatctttgccagacctagagattcttgctgag
agctccttgatgcatttattgagatggagttacaagacaggcatggataagtccatgagc
tccttaaatggacaaattgctatggtaaatggatctgaatttgcaatcatctctcttata
gcctcagagaatgacttcaggattccagaatctttgccatgccttcacgataaagtactt
gcagcagccgctgaagcagctagtaggatctcgacagaccagaaaagaaagcagaatcca
gcaggagttcttggtggaatcattaaaggattcaagggcaaagcagacgaaaacgcgaac
ttgagaagaagtttcaatgcacaaacccacggagaactgttggagtcaattttcttgaaa
gagtcatctgctgaagcatcaatacccagtcctgatgatccaatagaagaactgacaatt
gatgacatagacattgatgacgacgatgtacccctttcccctccaccagcgtcatcctct
acatctcacgtccataagaaaacaacagtagaggatgagagagcaaaactgtttgaagga
tcaagtgctgctgacaaaccaagaatgagaagtacccaagaaattcttaccaaatataag
tttggcggggatgcagcggcggcagctgctcatgcgaaagacaagctcatgcagaggcag
gagaaactcgagagaataagcctgcggacccaggagcttcaggacggggcggagaatttc
gcgtccctcgcccaggagctcgcgaagaacatggagaacaagaagtggtggaaactataa
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integrated database retrieval system
