Lolium rigidum (rigid ryegrass): 124673689
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Entry
124673689 CDS
T09103
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
KO
K03255
protein TIF31
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lrd03012
]
124673689
Translation factors [BR:
lrd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124673689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
CLU
Motif
Other DBs
NCBI-GeneID:
124673689
NCBI-ProteinID:
XP_047065674
LinkDB
All DBs
Position
7:226827037..226844104
Genome browser
AA seq
1936 aa
AA seq
DB search
MAPKSKRGKAKGEKKKKDEKVLPVAIDIIVNLPDQSDVILKGISTDRIIDVRRLLCVNTA
TCAITNYSLSHETRDGHLKDGADIATLKPYTLTLLEGEYDEDSAVAHVRRLLDIVACTAS
FGLPPPPPPPPSPKDADTAKELSNSKPAAAGSSGGRRMASPPPLPKESPAKDAEAAAKEA
AASAELEAEMSGACPRLGAFYEFFSLANLTPPLHFIKRVTQPRQEEQPSDDHLFYLEAKL
CNGKFVIVEARRKGFFSFGKQRVLCHNLVDLLRHLSRAFDNAYEDLMKAFLERNKFGNFP
YGYRANTWLVPPIAAQSPSTFPPLPAEDETWGGNGGGWGRDGKSDMLPWADEFLYLTSMP
CKTAEEREIRDRRAFLLHSLFVDVAIFRAIAAVRHVMESTDVLASTKIDDVLHSETVGNF
SITVTRDSSDASCKLDTKIDGSRATGMDSKHLAERNLLKGITADENTAAHDVDSLGIVNL
RYCGYVAVAKVNNIEKTIVNSSIKPADITDQPEGGAHALNINSLRMLLNEASATGEKKIH
TQSHRQEELTTAQTFAENLLKESLRKLEEEETDKQSFMRWELGACWVQHLQDQKNSDKEK
KQGGEKEKKKMADKSVKETKIEGLGKPLKALKHSKNVVDTAEKGPSSGNKNLSDGISSVE
SQKVEPSSVELPQGDCIASENESLLKDVLPDSAFTRLKDSETGLHQKSPPELIEMALKYY
DEVALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGRVVKLSEKLSHVQSLCVHEM
IVRAFKHIVRSVIAAISDMRQLALTIAAVMNLLLGVPESELSGSSPAVHPVVWRWLVAFL
KKRYQFELTEQHYDDVRKYAILRGLCHKVGIELAPRDFVMDSAFPFYKQDIISLVPVHKQ
VACSSADGRQLLESSKTALDKGKLEDAVNYGTKALAKLIMVCGPYHRMTAGAYSLLAVVL
YHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALY
LLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYH
AIAIALSLMEAYSLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKVIEQQEAARN
GTRKPDASIASKGHLSVSDLLDYINPNEESKGRDSESGKRRYSSIKVLSHSSENSNVVSP
DTSPRDSTIAIIDEEKPSNELLQDDSAKVMDIPETEVKESPLSMEVSPPSEQLVERAEVN
INSPREIFEDEILEQDDGWLPVQRPKSAAVLGKQIKHYRPAIRKAYDSENHTPVDASQYK
PRNSYSNNRYYFLKKRTVVPAAYTDPQQHMKVQTSTARFGRKIYKAMTYRIKPATSSTEV
QDTSTTTERISGKEEAQIAYSHVHNHSVDMKASEPHGALVVSSGNPPSYKDVALARPGTI
AKTQMQKPRDDVLHPSLGQIIAQEMKDSLVDAVQVDQKSVPSNTNNSKERNNVPEEMQHS
EQSRESQSEHESDNTGKDDLPDKLTPNTEKSSGSGSADGKTDITLFSNKGQEPTSGGNCG
AATEFSDSTVPAKAEKSAKSGIQFPEESLPTSIEPITVSAHTASMPEGLGAVESEKSKPE
LLLSNIDIKEMSNKKLSAAAPPFNPSPPAILSPLAVSASVGLPPPGPIPGVGPWPMNVSM
HPGHSNMVPNGPPLCTSPHHLYPPAPRSPNLLHPVPFLYPPYSQSQMVPSSTFPMNTTIF
RPNHYGWQPYMSPAASEFVPGPAWSNSHPVAYIPTPHVPDTISQSLADTHVLSDAAVVSV
GPSLDSNMVAVKEEMEVPVVVGSGNLISNKNLVEEHDKELKDAVKTELNPAMPGDSTPNI
GGTKLGSNMKNEDEGSFRIFLKGKSRRKQTLRIPISLLNKTYSSRSFKLDYNRVVRENDI
FRPASVSFAEVVSSGN
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagagcaagcgtggaaaggccaagggtgaaaagaaaaagaaagatgagaaa
gtcctccctgtggccattgacatcatcgtcaacctgccggaccagtctgatgtcattctc
aaggggatttccacggacaggatcattgatgtgaggaggctgctctgcgtcaacaccgcc
acgtgtgcaatcacaaactactccctctcgcatgagactcgtgatggtcacttgaaggat
ggtgctgatattgcgacattgaagccatatactctcaccctcctagaaggggagtatgat
gaggatagcgcggtggcgcacgtgcggaggctgctggacattgttgcctgcaccgcctcc
ttcggcctgccaccgccgccgccgcctcctccgtccccaaaggacgctgatactgccaag
gagctctcgaactccaagcctgccgcagctggctcctcgggtgggcgccgcatggcctcg
ccgccaccccttcccaaggagtcgcctgcaaaggatgccgaggcggcagccaaagaggct
gcggcttcggcggagctggaggcagagatgagcggtgcgtgcccccgcctcggagccttc
tacgagttcttctcccttgccaacctcacaccacccctccactttataaagcgagtgact
caacctcgacaggaggagcaaccgtctgatgatcatctcttttaccttgaggcgaagctt
tgtaatgggaaatttgttattgttgaagctcggagaaagggtttcttcagttttgggaag
cagcgtgttttgtgccacaatcttgtcgacctattgaggcatctcagcagagcatttgat
aatgcatacgaggatcttatgaaggcatttttggaacgaaacaagtttggaaattttcct
tatggttatcgtgcaaatacatggcttgttcctccaattgctgcccagtcaccatcaaca
tttcctccccttcctgccgaggatgaaacttggggaggcaatggaggtggttggggaagg
gatggaaaaagtgacatgttaccatgggccgatgagtttctttatctcacatctatgcct
tgcaaaaccgccgaggagagggaaattcgtgacaggagagcattcctgcttcacagccta
ttcgtagatgttgccatctttagagctattgcagccgtccgacatgtaatggagagtaca
gatgtcttagcctcaaccaagatagatgacgttttgcattctgagacagtgggaaatttt
agcatcactgtcacaagagattcttcagatgcaagctgcaagttggacactaagatagat
ggaagccgagccacaggaatggactctaagcatcttgcagagaggaacctcttgaaagga
ataactgcagatgaaaatactgctgcacatgatgttgacagtttgggcattgtgaatctt
agatactgcgggtatgttgctgtagcgaaggttaacaatatcgagaaaaccattgtgaat
tcttctattaagcctgctgatatcacagatcaacctgaagggggtgcccatgcattgaac
attaacagtttgagaatgctcctaaatgaagccagtgcaactggagaaaaaaagatacat
acacaaagtcacaggcaggaagaactaactacagcacaaacttttgctgagaacttgttg
aaggaaagtcttcgaaagcttgaggaagaggagactgataaacaatcatttatgagatgg
gaattgggtgcctgttgggttcagcacttgcaagatcagaaaaattctgataaggagaaa
aaacaaggtggtgagaaggaaaagaagaaaatggcggacaaatctgtgaaagaaaccaag
attgaaggacttgggaagccgctcaaagctcttaagcactctaaaaatgtggttgatact
gctgaaaagggaccctcatcagggaacaaaaatttgtctgatggaataagctctgtggaa
agccagaaagtcgagccatcatctgtagaattgcctcaaggagactgcattgcctccgag
aatgaaagcttgctgaaggatgtattaccggattctgcctttacaaggctgaaagattca
gaaacagggctccatcagaagtcaccacctgagttgattgagatggctctgaagtactat
gatgaagttgcacttcctaagctggttgccgattttggttctttggaactttcacctgtt
gatggtaggaccttgacagatttcatgcataccaggggcctacagatgcgatccctcgga
cgagttgtcaaactttcagagaagctttcacacgtacagtccctttgtgtgcatgaaatg
atagtgagagcattcaagcatattgtccgatctgtgattgctgccatttccgacatgcga
caattagcattaacaatcgctgcagtgatgaacttacttcttggggtccctgaatctgaa
ttatctggaagttcacctgctgtgcatcccgtagtgtggagatggctcgttgctttcttg
aaaaagcgataccagtttgagctcacagagcaacattatgatgatgtgaggaaatacgct
atactgagaggactatgccataaggtgggcattgaattggcaccccgagattttgtcatg
gattctgctttcccattttacaaacaggacattattagcctggtgcctgtacataagcaa
gttgcgtgctcatctgcagatggaaggcaactcctcgaatcctctaaaacggctcttgat
aagggtaaacttgaagatgctgttaattatgggactaaggctcttgccaagcttataatg
gtgtgtggtccctatcatcgaatgacagctggagcttatagccttctagctgttgttttg
taccacactggtgattttaatcaggctactatatatcagcaaaaggccttagacatcaat
gagagagaacttggccttgatcaccctgatacaatgaagagttacggagaccttgctgtt
ttctactatcgtctacaacatacagaactggctctgaagtacgtcaagcgtgcattatat
cttctgcatcttacatgcgggccatctcatccaaacacagctgcgacatatattaatgta
gctatgatggaggaaggcttgggcaatgtgcatgtagctcttaggtacttgcacaaagct
ctaaagtgcaaccagagattacttggacctgatcatatccagactgctgcgagctaccat
gctatcgccattgctctctcattgatggaagcttattccttgagtgttcagcatgagcag
acaaccttgcaaatccttcgtgcaaaacttggaccagatgatcttcggactcaggatgct
gcggcgtggcttgaatactttgaatcgaaagtaattgagcaacaagaagctgcccgcaat
ggaactcgaaaacctgatgcatcaattgctagtaaaggacacctaagtgtatctgatctt
cttgattacatcaatcccaacgaagaaagcaaaggaagagattccgaatcaggcaagagg
aggtactcaagcataaaggttttatcacattcgagtgagaattcaaatgtagtaagtcct
gatacatctccaagagattctactattgcgattatagatgaggaaaagccaagtaacgag
ctgctgcaagatgatagtgctaaggtcatggatattcctgaaactgaggttaaagagagt
cctttatccatggaggtttcaccaccttctgaacagctggtagagagagctgaggtgaac
atcaattcacctagggagatttttgaagacgaaatactagaacaggatgatggttggctt
cctgttcaaagacctaaatcagctgcagttttaggaaaacagataaagcattaccggccc
gccataaggaaggcatatgactctgagaatcatacaccagtagatgcttcccaatataag
ccaaggaattcctattcaaataaccgttattacttcttgaagaagagaactgtcgtacct
gcagcatacacagatcctcaacagcatatgaaagtccagacatcgactgccaggtttggt
cgtaagatatacaaggctatgacctaccggattaagccagcgacttcttccacagaagtg
caagatacttctacgaccacagagcggataagtggtaaagaagaagcccaaatagcttat
tcacatgtacacaatcattcagtagatatgaaagcaagtgagccacatggagctttggtt
gtaagttctggaaatccgccatcatacaaagatgttgcattggcacgtccaggtacaata
gccaagactcaaatgcaaaaacctagagatgatgtattgcacccatcacttggtcaaatt
attgcacaagaaatgaaggattccttggtcgatgcagttcaagtggaccagaaatctgtg
ccttcaaatacaaataattccaaagaaagaaacaatgtgccagaagaaatgcagcattcg
gaacaaagcagagagtcacagagtgaacatgagagtgacaatactgggaaagatgactta
ccagataaattaacaccaaatactgagaaatcttctggcagtggctctgcagatggtaaa
acagacattaccttattcagtaacaaaggtcaagaaccaacaagtggtggcaactgtggt
gcagccactgagttctcagattctactgtacccgcaaaagctgaaaagagtgcaaagtct
ggcatacaatttcctgaagaatctctaccaactagtattgaacctataacagtttcagcc
catacagcaagtatgccagaaggccttggagctgttgaaagtgagaagtcaaagcctgaa
ttgctgctaagtaatattgatataaaagagatgtctaataagaagctatctgctgctgca
cctccattcaatccgtctcctccagctatccttagcccacttgctgtaagtgcaagtgtt
ggtctcccaccaccaggtcccattccaggtgttgggccctggcctatgaatgtctccatg
catcctggacattcaaatatggtgccaaatggtcctccactgtgcacatccccacatcat
ttgtaccctcctgctcctcgatctcctaatctcttgcatcctgtgccatttctttatcca
ccatacagtcaatcacagatggttccaagcagcacatttcccatgaacactactatattt
cgccctaaccattatggatggcaaccttatatgagcccagctgcgtctgaatttgtgcca
ggaccagcatggtcaaacagtcatccagtcgcttacatcccgaccccacatgttcctgac
actatttctcagtctttagcagatacacatgttctatctgatgcagctgttgtaagtgta
ggaccttcactggacagcaatatggttgcagtgaaggaggaaatggaggtccctgtggtg
gtaggcagcggtaatttgatcagcaacaaaaatttggtagaggaacatgataaagagtta
aaggatgccgttaaaactgaacttaatcctgccatgccaggagacagcacacctaatata
ggtggaacgaagttgggaagcaacatgaagaatgaagatgaaggcagttttcggatattt
ttgaaggggaaaagcaggcgaaaacaaactcttaggatcccaataagtttgcttaacaag
acatatagctctcgttctttcaagcttgactacaacagagtagtcagagagaatgacatc
ttcaggccagcgagcgtctcttttgctgaagtagtttcttctggcaactga
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integrated database retrieval system