KEGG   Lolium rigidum (rigid ryegrass): 124673905
Entry
124673905         CDS       T09103                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124673905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrd03019]
    124673905
Messenger RNA biogenesis [BR:lrd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     124673905
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Vps36-NZF-N AAA_22
Other DBs
NCBI-GeneID: 124673905
NCBI-ProteinID: XP_047065909
LinkDB
Position
7:28123365..28127326
AA seq 683 aa
MFVPKTDNQSDPEDPRGSSGPWQCSICAQENDTGLISCELCGVLRDLSLYFNNADEAEGG
DKRRSKHSGVSVLARSLFTPSSPKSKPVVFSDGFKGNKNATGYTQASLDALHKTYMTHKQ
RRINIVPFKFDIPSPDDMVSTGLKSSRHLRRDFVDITVKKAMADDDDLVTEKDTNTDPSS
VMNLDEAGGSSSSVAADFQDKTLALDNELQNLSLERKIKSKKAKIKKPNHVSQYKPERWM
LQGEDQEMPRQLNLAIVGHVDSGKSTLCGRLLHALGRISKKQMHKNEKEAKEKGKGSFAY
AWAMDESADERARGITMTVGVAYFDTKNYQVNLLDSPGHKDFVPNMISGVTQSDAAVLVV
DASIGSFESGMGINGVGQTKEHAQLIRSFGVEHLIVAVNKMDSVEYSKERFSYVKSQLGI
FLRSCGYKESAISWVPLSAMENENLVARASDTRLTSWIDGSCLLNAIDSLSPPHRDVLKP
LRLPICDVISSHMLGQVAVCGKVVSGAIRSDSKVLVMPAGELATVRIIERDSSRLSLARA
GDNIAIGLQGIDPIHVMSGGVLCHPDYPVSVSSSLELKILVLDITVPILPGLQLELHVHH
AKVSAGLVRIVSLLDQKTGKALAKKPRLLTARQAAIVEVKLERVVCVEEFSALKALGRVF
LRSQGCTIAVGVVTRVHELQEEA
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgtttgttcctaaaacagataaccaatctgatcccgaggatccacgtggaagttctggt
ccttggcaatgctccatttgcgcacaggaaaatgacaccggtcttatatcctgtgagcta
tgcggcgttcttcgggatttgtcgctgtatttcaataacgccgatgaagcggaaggtgga
gataaacgcagaagcaagcattctggagtatctgtactggcaagatcgcttttcacacca
tccagtccaaaatcgaaacctgttgttttctcggatggcttcaaaggcaacaaaaatgca
acaggatatacacaagcttcgttggatgctctgcataagacatacatgacgcataaacag
cgccgcattaacatagtgcctttcaagtttgatataccatctcctgatgacatggtctct
acgggcttaaaatcatccagacatttgagaagagattttgttgatatcaccgtaaagaaa
gctatggctgatgatgatgatcttgtaactgagaaggacacaaatacagacccaagttca
gtaatgaatttagatgaagctggtggaagtagtagcagtgttgctgctgattttcaagat
aaaactcttgctttggacaatgagctacagaatttgagtttggagaggaagataaaaagc
aaaaaagccaagattaagaagccaaatcatgtttcacagtacaaaccagaacgatggatg
ctccagggtgaagatcaagaaatgcccagacaactaaatcttgctatcgttggtcatgtc
gactctgggaaatcaactttatgtggtcgattgctgcatgcccttgggaggatttcaaaa
aagcaaatgcataaaaatgagaaagaagccaaagaaaaggggaaaggatcgtttgcatat
gcttgggctatggatgagagtgctgatgaaagggcacgtggcattacaatgactgtgggc
gtagcatactttgacaccaaaaactaccaagttaatctgcttgactcccctggtcacaaa
gatttcgttcctaatatgatttctggagttacacagtctgatgcagctgtcctagttgtt
gatgcctctatagggtcattcgagtcgggtatgggtattaatggggttggacagacaaaa
gagcatgcacagcttatcagaagctttggtgttgagcacttgatagtcgctgttaataag
atggattcagtggaatattcgaaagaacggttcagttatgtgaagtcacaacttggtatt
tttctccggtcatgtggttataaagaatcggcgatttcttgggttcctttgagtgcgatg
gaaaatgaaaatttggtggcacgagcttcagatactcgtctaacatcatggattgatgga
agttgtcttctgaatgccattgactcgttgtcacctcctcaccgggacgttttaaagccg
ctgcgccttccaatctgtgatgttatttcatcccacatgctggggcaagtggctgtctgt
ggtaaagtcgtgtctggagcaatccgaagcgattccaaggttctagttatgcctgccgga
gagttggctacagtaagaatcatcgagcgggactcctctcgtctcagcttggcaagagcc
ggggacaacattgcgattggtttgcaagggatcgaccctatccatgttatgtccggtgga
gttctttgccatccagattaccccgtgtctgtgtcctcttccctggagctgaagatcttg
gttctggacatcactgtaccaatactgcctggccttcagcttgagctccacgtgcaccat
gcgaaggtgtcagcgggcctggtcaggatagtatcactgctggaccagaagacagggaag
gccttggcgaagaaaccgcggctgctgaccgcgagacaggccgccatcgtcgaggtgaag
ctagagagggtggtctgcgtggaggagttctcggccctgaaggcgcttggccgtgtgttc
ctgcggtcgcaagggtgcaccatcgcggtgggcgtggtgacccgtgtacatgagttgcaa
gaggaagcttag

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