Lolium rigidum (rigid ryegrass): 124673952
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Entry
124673952 CDS
T09103
Name
(RefSeq) protein argonaute MEL1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124673952
03036 Chromosome and associated proteins [BR:
lrd03036
]
124673952
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124673952
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124673952
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124673952
microRNA pathway
RISC loading complex
124673952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
124673952
NCBI-ProteinID:
XP_047065953
LinkDB
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Position
7:202979280..202985707
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AA seq
834 aa
AA seq
DB search
MIVRANHFLVGFADKDICHYDVAISPEPKTRRINRVIMTELMNKHRTSSLGGQSVAYDGS
KSLYTAGELPFTVMDFSVKLGKERREIEYKVTVRFAARANLYHLQQFLGGRQRDCPQDTI
QALDVVLRESPCQNYVTVSRSFFSATFGHRDIGGGLECWRGFYQSLRPTQMGLSLNIDIS
STSFYRPIPVMEFARDCLNLRTVEANRPPSDRDRLKLRRALRGVRVETTHQEGKKSIYKI
TGITSDPLVQLNFPLDEGTQMTVVQYFWDRYKYRLKFTSWPCLQSGSAARPIYLPMEVCT
IIKGQRFSRKLNEKQVTAILKATCERPKEREESILKMVDHNNYAADTLAREFGVDVTNKM
VNVQARLLPPPMLKYHDSGREKSCVPSVGQWNMINKKMVDGGNVQSWTCLNFSRMPVEGV
RMFCGDLVQMCNSIGMVFNQIPVAEIRSASANNIEGALKDVHQRVPKLQLLIVILPDISG
QYGKVKKVCETELGIVSQCLKPDKVNKANKQYFENVALKINVKVGGRNTALQQALSRKMP
FVSDIPTIIFGADVTHPAAGEDSSGSIAAVVASMDWPAITKYRAVVSAQPPRQEIIQDLF
WTTTDPEKGIMPGGMIRELLLAFYRQNNNIKPQRIIFYRDGVSEGQFAEVLMYEMDAIRK
ACQSLQKDYLPKVTFVVVQKRHHTRLFPEVHMKETDRSGNILPGTVVDTNICHPTEFDFY
LCSHAGIQGTSRPAHYHVLYDENRFTADGLQSLTNNLCYTYARCTRSVSVVPPAYYAHLA
AFRARYYDEPLEGSDSTSVVSAGSRAVAGATGPPVAYRRLPQIKENVKDVMFYC
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgcgggcgaaccacttcctcgtgggcttcgccgacaaggacatctgccactac
gacgttgccattagtcctgagcctaagacaagacggatcaacagggttatcatgaccgag
ctgatgaacaagcaccgcacatcctctctcggcggtcaatcggtggcttatgatggcagc
aagagcctgtacactgcaggtgagctgccattcacagtgatggatttctccgtcaagctg
gggaaagaacgaagagaaatcgagtacaaggtaacagttcgatttgccgcgcgggcaaac
ttgtatcacctgcagcagttcctaggtggcaggcaaagggactgtcctcaggacaccata
caagcgctcgatgttgtgctgagggagtcaccttgtcagaactatgtcactgtttctcgg
tccttcttctcggcaacgtttggccatcgtgacattggtggtggcctcgagtgttggaga
gggttttaccagagtttgcggcccacgcagatgggcctgtcactgaatatagacatatca
tcgacgtcattttataggcctatcccggtgatggaatttgctcgggattgtctgaatctg
aggactgtagaggcaaatcggcctccttctgatagggaccgtctgaagcttaggagagca
ctgcgaggggttcgtgttgaaaccactcaccaagagggaaagaaaagtatatacaagata
accgggattacttctgaccctctggttcagctcaactttcctctggatgaaggcacccaa
atgactgttgtacaatacttttgggaccggtacaagtatagactgaaattcacctcatgg
ccttgtcttcagtccggcagtgctgctcgtcctatatatttgcccatggaggtgtgcaca
attattaaagggcagaggttctccaggaagcttaacgagaaacaagtgactgccatactt
aaagctacttgtgaacgtcccaaggagagggaggagagtatacttaagatggttgaccac
aacaactatgcagctgatacgctggcacgggagtttggagttgatgttaccaataaaatg
gtgaatgtgcaggctcgtttgctacctccacccatgctcaaatatcatgattctggaagg
gagaaatcttgtgtaccaagtgttggccaatggaacatgatcaacaagaaaatggttgat
ggaggaaatgttcagagctggacttgcttgaacttttcacgcatgccagttgaaggggtg
cgtatgttttgtggcgacttagtccaaatgtgcaattccatcggcatggttttcaatcaa
attccagttgcagagatccgctcagcttctgctaataacatagaaggtgctttgaaggat
gtacaccagagggtccctaagctccagttgcttattgtgattctcccagacatttctggc
caatatgggaaagttaagaaggtgtgcgaaactgagcttgggatagtatctcaatgtctc
aagccagacaaggtcaacaaagcaaacaagcagtattttgaaaacgttgcgctcaaaatc
aatgtcaaggttggagggagaaatacagctcttcagcaagctctttcacgcaaaatgccg
tttgtcagcgacatacctacaatcatttttggtgctgatgtaacacatcctgcagcaggg
gaggattcctctgggtcgattgcagctgtggttgcctctatggactggcctgcaatcaca
aagtacagagctgtggtttctgcacaaccacccaggcaggagattattcaagatctcttc
tggacaactacagatccagagaagggcatcatgcccggtggaatgatcagggagttactg
ctagcattctataggcagaacaacaatataaagccccagaggattatattctacagggac
ggggtcagcgaagggcagttcgctgaagttctgatgtatgaaatggatgccatcaggaag
gcctgtcaatctttgcagaaggattatctgcccaaagtgacatttgtggttgtccagaaa
aggcaccacacaaggctcttccctgaggtgcacatgaaggagactgacagaagtgggaac
atccttcctggaaccgtggtggacacgaatatatgccatccgacagagtttgacttctac
ctttgtagccatgcagggattcagggcacaagcagaccagctcactaccatgttctgtat
gacgagaatcggttcactgccgatgggctacagtcgctcacgaacaacctatgctacaca
tacgctcgctgcactcgctctgtgtctgttgttcctccagcctactacgctcacctggcg
gcgttccgtgcacgatattatgacgagccgttggagggctctgacagcacctcggtcgtc
agcgctgggagccgggcggtggccggagcaacaggccctcctgtggcgtaccgcaggctc
ccccagatcaaggagaacgtcaaggacgtcatgttctactgctga
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