Lolium rigidum (rigid ryegrass): 124674025
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Entry
124674025 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03030
DNA replication
lrd03410
Base excision repair
lrd03420
Nucleotide excision repair
lrd03430
Mismatch repair
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124674025
03410 Base excision repair
124674025
03420 Nucleotide excision repair
124674025
03430 Mismatch repair
124674025
03440 Homologous recombination
124674025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124674025
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124674025
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124674025
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124674025
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124674025
MMR (mismatch excision repair)
DNA polymerase delta complex
124674025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
124674025
NCBI-ProteinID:
XP_047066018
LinkDB
All DBs
Position
7:complement(285605890..285619207)
Genome browser
AA seq
1101 aa
AA seq
DB search
MSSGGKRRAAPAAAPSAAAAKRAHPTPPGAPQPPPPAAAAAEEEEDMMDEDVFLDETILA
EDEAALLLLDRDEALASRLSRWKRPALPADLVSGCSRSVAFQQLDIDYVIGESHKELLPK
SSGPAAIIRIFGVTREGHSVCCQVHGFEPYFYISCPSSMGPDDISRFKQILEVRMKESNR
SSNVPKFVKSVELVQKQTIMHYQPQKSQSFLKIVVTLPTMVASCRGILERGITMEGLGSK
SFLTYESNILFALRFMIDCNIVGGNWLEVPAGKYRKAARIMSYCQLELDCLYSDLVSHAA
EGEYSKMXPFRILSFDIECAGRKGHFPEPTHDPVIQIANLLTLQGEAQPFVRNVMTLKSC
SPIVGVDVMSFDTERDILLAWRDLIREADPDIIIGYNICKFDLPYLIERAEVLKIVEFPL
LGRIRNSRVRVRDTTFNSRQYGTRESKDVTLEGRVQFDLLQAMQRDYKLSSYSLNSVSAH
FLGEQKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTG
VPISFLLSRGQSIKVLSQLLRKAKQRNLVIPNMKGQGSGQDTFEGATVLEARAGYYEKPI
ATLDFASLYPSIMMAHNLCYCTLVPPEDVRKLNLPPESLYKTPSGEIFVKQELQKGILPE
ILEELLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISS
SVTSYGRQMIEHTKKLVEDKFTTLNGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREA
ADFISETFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL
VKNLVTECLHKLLVDRDIPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAA
HVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNNIPIDPHYYLE
NQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCLGCKAVISG
PNQTLCSHCKGREAELYCKTVANVSDLEMLFGKLWTQCQECQGSLHQDVLCTSRDCPIFY
RRRKAQKDMAEARVQLDRWDF
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaggcggcaagcgacgggcggcgcccgccgcagcgccctccgcggcggcggcg
aagcgggcccaccccacgccgcccggcgccccgcagccgcctccgccggccgctgcggcg
gcggaggaggaggaggatatgatggacgaggacgtgttcctcgacgagactatcctggcg
gaggacgaggcggcgctgctgctgctcgaccgggatgaggccctcgcctcccgcctctcc
cgctggaagcgccccgccctccccgccgacctcgtctccggttgctcccgctccgtagct
tttcagcagctggatatagattatgttattggtgagagccacaaagaattgcttcccaaa
tcttctggcccggcagctataatcaggatttttggtgtcaccagagaaggtcacagtgtg
tgctgtcaggttcatgggtttgaaccatatttctacattagctgcccatcaagcatgggt
cctgatgatatttcacgcttcaaacaaatactagaggtgaggatgaaggaatcaaatagg
agtagcaatgtgccaaagttcgtgaagagcgttgaactagtgcagaagcagacaattatg
cattaccaaccacaaaaatctcagtctttcctgaagatagtagttaccctacctacgatg
gtagctagttgtcgtggcatccttgaaaggggtataacgatggaaggccttggttcaaag
agtttcctgacatatgaaagcaacattctttttgcccttcgttttatgattgattgcaac
attgttggtggcaattggcttgaagttcctgctgggaagtacaggaaagcagctcgcatc
atgtcctattgccagctggagttggattgcctatactcagatttggtaagccatgctgct
gaaggggaatactctaagatgngcccctttcgcatattaagttttgacattgaatgtgct
ggtcgcaaagggcacttcccagaaccaactcatgatcctgttattcagatagctaatttg
ctcacgcttcaaggagaagcccagcctttcgtacggaatgtcatgacccttaaatcatgc
tctcccattgttggagttgatgtaatgtcatttgacacagagagagatattctacttgct
tggagggatttaatacgtgaggcggatcctgatattataattgggtacaatatctgcaaa
tttgatcttccttatcttattgagagagctgaagttcttaagatagtggagtttccgctg
cttggtcgaatcagaaatagtcgtgtccgtgtccgtgacactaccttcaactcaaggcaa
tatggtacgcgtgaaagtaaagatgtaactttggagggaagggtacaattcgacctcctg
caggctatgcaaagggactacaagctgagttcttattcattgaactctgtatctgcacat
tttcttggagaacaaaaagaggacgttcaccattcaattatatctgatcttcaaaatggg
aactcagagacacgaaggcgtctggcagtttattgcttgaaggatgcttatcttccgcag
cgactgttagataaattgatgtacatctacaactatgtagagatggcgagggtcacagga
gtccctatttcatttctgctgtcaaggggacaaagcattaaggtcctctcgcagttgctc
aggaaagcaaaacagagaaaccttgttataccaaacatgaaaggccaaggttctggacaa
gatacctttgaaggtgcaactgttttggaggcaagggctggatattatgagaaacccatt
gcaactttggactttgcttctctgtatccatccatcatgatggcccataacctatgctac
tgcactttggtgccccctgaagatgtccggaaactcaacttgcctccagaaagcctctac
aaaaccccatctggtgaaatatttgtgaaacaagaattgcaaaagggtatacttcctgaa
atccttgaagaactgttggctgctcgaaaaagagcaaaagcagatttgaaggaagcaaag
gacccatttgaacgcgcagttcttgatggtcgtcagcttgccctaaagataagtgcaaac
tcagtttatggttttactggagctactgttggtcaattaccctgtttagagatttcttct
agtgtgacaagctacggtagacagatgattgagcatacaaagaagcttgttgaagataaa
ttcacaacacttaatggctatgagcataatgcagaggtgatttatggagatactgattct
gtgatggtacagtttggtgtttctactgttgaggacgcaatgaaattgggaagagaagct
gcagactttatcagtgaaacatttattaagcccatcaagctagagtttgagaaaatatat
ttcccatatctactgatcagcaagaagagatatgctggtttgtactggacgaatcctgag
aaatttgacaaaatggatacaaaaggtattgaaacagtaagaagggacaactgtttattg
gtaaagaacctggtaactgagtgccttcataaattactagtggaccgagacattcctggt
gcagttcaatatgtcaagaacaccatatccgatctattaatgaaccgtgtggacttgtca
cttctagttataacgaagggtttgactaaaacaggagaggactatgctgtaaaagctgcc
catgtggagcttgctgagaggatgcggaagagggatgctgctactgcaccaactgttggt
gaccgagttccttatgttataataaaagcagccaaaggggcaaaggcatatgagaagtca
gaagacccaatttatgttctggataataacataccaatagatccccattactaccttgag
aatcaaattagcaagccactgttgagaatatttgaaccaattctgaagaacgccagcaga
gagctgcttcatggaagtcataccagagctgtttcaatctcaactccttcaaatagtggg
ataatgaaatttgcaaagaaacaattgacttgccttggatgcaaagcagttataagtggt
cccaatcaaacactttgctcacattgcaagggaagagaagcagagttatactgcaaaacc
gtagcaaatgtttctgatctggagatgctctttgggaagctatggacacagtgccaggag
tgtcaaggctccctgcaccaggacgttctctgcaccagtcgggactgccccattttctat
cggcgaaggaaagcgcagaaggacatggctgaagctagagtgcagcttgatcgttgggac
ttctga
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integrated database retrieval system
