Lolium rigidum (rigid ryegrass): 124674059
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Entry
124674059 CDS
T09103
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124674059
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124674059
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
124674059
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
124674059
NCBI-ProteinID:
XP_047066047
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Position
7:complement(138799402..138805952)
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AA seq
622 aa
AA seq
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MGDRDEEEELQMALRMSLHGSPPAQPDPKRSKPPSLPAGGESPEAAARRKQRDLMAAAAE
KRLRSLPSPQPAAAVSPPPPPPTPEAAKVEPEPAAVPMEDVKEAEMAVEVEVQGDELPPD
VAEKLWVMVFGIGVSKAVLAQWTNQGIRFSSDAETTMGLVQHEGGPCGVLATVQAYVLKY
LLFFSDNLGNPEVSDPSYASGQRRFYQSSFAARDDFSSLTEDGKTRALVHAMVEILFLCG
AGKKAAVALIGGVNRGVSGHDNTKEIDAALEGLSVESAMDIQKVLRISTFTSRKDAFHLL
LANIRLFESRLGAMLFLISSLLSRGLECIQADRDDPSQPLVTAPFGHASQEIVNLLLCGE
AVPNVFDGKMDLGGGMSLKGIPNNVEVGFLTLLESLNLCKVGQYLKCPKWPIWVVGSESH
YTVLFALNPNVQEENELEERESKIRRAFDAQDQSGGGGFISVEGFQQVLRDTDINFPSDK
LEDLCNPGIIVWSEFWQALLQLDKRSGGMKDPTGLMGKKQFTIYHFNGIAKSVLNGNANI
GGSTPIQRPRICKLNVSVPPRWTQDEYLADVVSSSTSGSKDDSVLSLAPPFQTCQHAPLV
DCIRTRWPRAVCSWVGDVPSIV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcgggacgaggaggaggagctgcagatggcgctgcgcatgagcctgcacggc
tcgccgcccgcgcagcccgaccccaagcgcagcaagcccccgtctttgcccgccgggggg
gagtcgccggaggccgccgcgcgacgcaagcagcgcgacctcatggccgccgccgccgag
aagcgcctccgctccctcccctcgccccagcccgccgccgccgtttcgccgcccccgccg
cccccgaccccggaggccgccaaggtggagccggaacctgccgcggtgcccatggaggac
gtgaaggaggcggagatggcggtggaggtggaggtgcaaggggacgagttgcccccggac
gtggccgagaagctctgggttatggtgttcgggatcggggtttccaaggctgtgctggcg
cagtggaccaaccagggtatcaggtttagctctgatgcagaaacaactatgggactggta
cagcatgaaggcggtccctgtggtgtcttagctacagtacaggcatatgtccttaaatat
cttttgtttttctctgataatttgggtaacccagaggtcagtgatccatcatatgcttcg
ggacaaagacgtttttatcagagttcttttgctgcaagggatgatttctcttctctaact
gaggatggaaagacgagagcattggttcatgctatggtggaaattctatttttatgtgga
gctgggaaaaaagctgctgtggcattgattggaggtgtcaatcgtggggtaagtggacat
gataacactaaggaaatcgatgctgctttggaaggcctttctgttgaatcagcaatggat
atccaaaaagttcttagaataagtacttttacctcaaggaaggatgctttccacttgctt
ctggcaaacattcgtctgtttgaaagtcgactgggagccatgctatttcttatctcttct
ctactctcgcggggattggaatgtatccaagcagacagggatgatccaagccaaccattg
gtgacagctccatttgggcacgcttctcaggaaattgtgaacttattgctttgtggagag
gctgtcccaaatgtatttgatggcaagatggaccttggcggcggcatgtccctgaaaggc
ataccgaataatgttgaagttggtttcctcacccttctggaatcactaaatctgtgcaag
gttggtcagtacctaaaatgcccgaaatggcctatatgggtggttggaagtgaaagtcac
tacactgtcctttttgccctaaatcccaacgtccaagaggagaatgagctggaagagcgg
gaatccaaaattaggagggcatttgatgcacaagatcaaagtggaggtggaggctttatt
agtgtcgagggattccaacaagttctcagggacactgacataaattttccttctgataag
cttgaggatctatgtaatccgggcattatagtatggagtgaattctggcaggcacttcta
cagttggataaaaggtctggaggcatgaaggatccaactggcctgatgggcaagaagcaa
ttcactatctaccacttcaatggaattgccaagtctgtgctgaatgggaatgcaaacata
ggaggctcgaccccaatacaaagacctaggatatgcaagttaaatgtcagcgtcccacct
aggtggactcaggatgagtatctagctgatgttgtaagctcttcgaccagcggtagcaag
gatgatagtgttctttctcttgctccgccatttcagacttgccagcatgcaccattagta
gactgcataagaactcgatggccacgagcagtttgcagctgggttggagatgtgccaagt
attgtctga
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