Lolium rigidum (rigid ryegrass): 124674068
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Entry
124674068 CDS
T09103
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124674068
Enzymes [BR:
lrd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
124674068
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124674068
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Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
TRM5-TYW2_MTfase
Kelch_1
Beta-prop_TYW4
Kelch_HCF
Kelch_2
Kelch_FKB95
TYW2_N_2
Beta-prop_Calicin
NANM
DUF6242_C
MTS
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
124674068
NCBI-ProteinID:
XP_047066057
LinkDB
All DBs
Position
7:247470646..247479068
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AA seq
1088 aa
AA seq
DB search
MDFARRKAAALAALSSPAPDKSPKGGVDAPIAQLLDALNSHADLFTTSSCSGRISVLAQP
TPKPHTSDPKPKKKARGGGWVYISHDPADPDAVVELLFSGTGGGEKGAGDELVFRFEPMI
VAVECRDVSAAASLVAAAIHAGFRESGITSLQRRAMVAIRSSIRMEVPLGLTDELVVSPE
YIRYLVSIANCKMEANKKRMDGFLDLLQSKGLPGIPRLQDDHTKEDDRCLGPEVKLPLSQ
SVQTRDDLLTEKRSGVYNCDVGDKSDGEFGENSIEGSYFENRNPVRNNGAKHGFGNAERL
MQEEKLSASSGNKSSHLFVTELKTSGEPIEKLFLWGQSACALTVGGEHCILTFGGFGGPG
RHSRRNYSLLLDPKSGLLTEIIVKDTPSPRLGHTITAVGNHIYAIGGRAGPSEILDDVWV
LQSTENRWSRVECSGNIFQPRHRHAAVAAALKIYVFGGLSNEGIYSCMNILDTESMQWDV
IPAASEWPCARHSHSLVSYGSKLFMFGGHDGQRALDDFYSFDVTTLRWNKEITSGRTPSP
RFSHCMFIHKHYLGILGGCPIRENNQEVALLNLKHSVWLHVSIPSLGHCLCVRSSPIVID
DDLVVIGGGASCYAFGTKFSQPVKIDLHLVESIFNLAYKKDDMVTQSCDALSTLDIQERD
QNGTFAGHNAKPKVDTATNGFADSDFLVFQLEKKYAKLGKDILKKFGWLDLARKVRVSHD
NVNILFPVSRTFHALITDQYSKTLDDNSCISEELLGCPEKKLVGANITLHKALEILSSCH
GSFLKDELALSRKASKSPPQTIMRELVSLLLERKGMPSQLLEQLPTRWETLGDITVLPKT
CFKDPLWESIGAELWHLIAKSLGAQRLARQGKIMPNGTRDSTLELLVGDNGWVTHYENGI
SYSLDATKCMFSSGNRSEKLRMGQLDCRDEVVVDLFSGIGYFVLPFLVKAHAKLVYACEW
NPHALEALNRNVMDNHVADRCVILEGDNRLTAPKGVADRVCLGLIPSSECSWATAVRALR
VDGGILHIHGNVNDTDEARWLDNVVESISSIATTHGLSWKVSLDHVERVKWYGPHIRHVV
VDIRCRPN
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgctcgccggaaagcggcggcgctggccgcgctctcctcgccggcgccagac
aagtccccaaagggcggagtagacgcccccatcgcccagcttctcgatgctctcaactcc
cacgcggacctcttcaccacctcctcctgctccggtcgcatctcagtcctcgcgcagccc
acgcccaagccccacacgagcgaccccaagcctaagaagaaggcccggggcggcgggtgg
gtgtacatctcgcacgaccccgcggacccggacgccgtcgtggagctcctgttcagcggg
actggaggcggagagaagggtgcaggggatgagctggtgttcaggttcgagccgatgatc
gtggcggtggagtgcagggatgtttcggcggcagcgtcgctcgtcgccgccgcaatccat
gcggggttccgggagtcaggtatcacaagcttgcaaagacgtgcgatggtagcaataagg
tcttcaattcgcatggaggtgcctcttgggctgactgatgagcttgtagtttctccggag
tacatccggtaccttgttagcatcgccaactgtaaaatggaggcaaataagaagcgaatg
gatggatttctggatcttttgcagtctaagggtctgccaggtatacccaggttgcaagat
gatcatactaaagaagatgatcgttgcttgggcccggaagttaagttgccactcagtcag
agtgtacagacacgtgatgatctgttaacagaaaagagaagcggtgtctataattgtgac
gttggtgacaaaagtgatggtgaatttggtgagaattcaatagaaggatcatattttgaa
aatcgaaaccctgtacgcaacaacggtgccaagcatggttttggtaatgctgaacgatta
atgcaggaggaaaaactgtcagcatcatcgggaaataaaagtagccatctttttgttacc
gagttgaagactagtggtgaaccgattgagaaactcttcttatggggccaatctgcttgt
gccttaactgttggtggagagcattgcatcctaacttttggtggttttggaggaccagga
aggcattcaagaagaaattactcccttttgcttgatccaaaatctggtttgttgacggaa
ataatcgttaaagatacaccttcaccacggttgggtcatacaattactgcagtaggcaat
catatttatgctattggaggtagggctggtccttcagaaattcttgatgatgtttgggtt
ttgcaaagcacggagaatagatggtcaagagtagagtgcagtggaaatattttccagcca
aggcaccgacatgctgctgttgctgcagccttgaaaatatatgtttttggtggactcagt
aatgaaggcatatattcttgtatgaatatattggacacagaaagcatgcagtgggatgtg
attcctgctgctagtgaatggccatgtgctcgccattcacattctctggtgtcctatggg
tcaaaactgttcatgtttggtggtcatgatggtcagcgggcactggatgacttctatagt
tttgatgtaacaacactcaggtggaacaaagaaatcaccagtggaagaactccatctccc
agattttcacattgcatgttcatccataaacactacctcgggatacttggcggttgccct
attagagaaaacaaccaggaagttgcattgctaaacttaaagcatagtgtctggttacat
gtctccattccatctcttggtcattgcctctgtgtccgtagctcacctattgtcattgat
gatgatcttgttgttattggcggcggtgcatcttgctatgcatttggaacaaaatttagt
caaccagtaaaaattgatcttcatttggtggaatcgatatttaaccttgcttacaagaaa
gatgacatggttacacaaagttgtgatgcgttatctaccctggatatacaagaacgtgac
caaaatggcacctttgctggtcataatgcaaagccaaaagttgataccgccactaatggt
tttgctgattcagattttctggttttccaattggagaagaagtatgccaaattagggaag
gatattctaaaaaagtttggatggttggaccttgctagaaaagttcgagtcagccacgat
aatgtcaatattctttttccagttagtagaacctttcatgccctaatcactgatcagtat
tccaagacacttgatgataactcatgtatctctgaagagctattggggtgtccggaaaag
aagcttgtaggcgctaacattactcttcataaagcattggaaatattgtcatcttgccat
ggttcctttttgaaagatgaactagctctcagccgaaaagcttctaaatctcctcctcaa
accatcatgagagaacttgtatctcttctactggaaagaaaaggaatgccctctcagttg
ctagagcagctgccaactaggtgggaaaccctaggtgatatcactgtgcttccaaagact
tgttttaaggacccactgtgggaatccattggagcagaactttggcacctaattgccaag
tcactcggggcacaacgtcttgctcgccaaggaaaaatcatgccaaatggcacaagagat
agcacattagaacttcttgtcggtgacaatgggtgggtgacccattatgaaaatggcatc
tcttattcacttgatgcaacaaaatgcatgttttcttctggtaatcgctctgagaagctt
cgcatgggacagcttgattgtagagatgaagtggttgtggacttgttttctggaatcgga
tactttgtgctcccatttcttgtgaaggctcatgccaagttagtttatgcatgcgaatgg
aatccacatgccctggaggctcttaaccggaacgtgatggacaaccatgtagcagatcgc
tgtgttatacttgaaggagacaaccgtctgacagcaccaaaaggagttgctgaccgtgtt
tgtctcgggctgataccctccagtgaatgtagctgggctactgctgttagggctttaagg
gttgatggaggcatactgcatatacatgggaatgtcaatgacacggacgaggcacgctgg
ttggacaatgttgttgaatccatcagtagtatcgccacaactcatggactatcttggaaa
gtctctctggaccatgttgaacgcgtcaaatggtatgggccgcacattcgacatgtcgta
gtcgatatcagatgccggccaaactga
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