Lolium rigidum (rigid ryegrass): 124674224
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Entry
124674224 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124674224
KO
K08518
syntaxin-binding protein 5
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124674224
Membrane trafficking [BR:
lrd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124674224
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
124674224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Synaptobrevin
TFIIIC_delta
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
124674224
NCBI-ProteinID:
XP_047066218
LinkDB
All DBs
Position
7:complement(313876491..313887581)
Genome browser
AA seq
1113 aa
AA seq
DB search
MFRKRLLKKVLQQRRNGGGPGGGAGAGEVAQLDAQIALHYGVPYAASVMGFDPVQRLLAV
GTLDGRIKIFGGDNIEGLLISPKSVPYKYLQFIQNQGLLVAVSNENEIQVWNLEFRQLFH
FSQWDVNITAFAVIEETFFMYLGDENGLLSVLKYDVDDGKLLRMPYNVTIHSLSEAAGVS
LLDTQPIVGILPQPDTLGTRVLIAFERGLLVLWDISEDRAIAVRGYGDLHMKGQVSGAQT
DATEHQIDNVDETEEEREICSLCWASRGGSTVAVGYITGDILLWDMTVSSRQGKQTDVSS
NVVKLQLASGSRRLPVIVLHWSAGSAKDTTKGGHLFVYGGDDMGSEEVLTVLSLESSNGL
ESVRCASRGDLKLDGSFADMILIPDTGVPDKIRASALFVLTNPGQLNFYDGSALFSGRKS
EEVYAQPEARKFPVAVPTIDPNITVTDLYSLTGTGHPSISLKKFCARQSVTHPISGNMKW
PLTGGVPSEMSQKEDRAVERIYVAGYQDGSVRIWDATFPILVPMFVLDAKVSDIILDGAN
ASVSSLAFCSLTLTFAVGTTSGLVRMYKLHEHTGDSSFHFVSESKQEVHAVHHGRGFHCH
VAFMASNSPVRSLRFTGSGEVLAVGYQNGQVGMFDASQLSMMFCVDCASGTNSPVVSLSI
YGVVSSAAEGDQSQKEIAKSGKNSTDVLLSLTKDARLTVIDSTSGLVINSHLLDQKQLSA
VSMYVIDVASDEEQTQSSGDKSPPQSQTGKEQNDLDQKQAQGAETNQKKASQHSHSGDSN
SLLLVCFEDEALLFSLTSLIQGSNKHLDKIKLAKHCCWSAIFKNKDDKACGLILAYQTGI
IELRSLPDLEILAESSLMHLLRWSYKTGMDKSMSSLNGQIAMVNGSEFAIISLIASENDF
RIPESWPCLHDKVLAAAAEAASSISTDQKRKQNPAGVLGGIIKGLKGKADENANLRRSFN
AQTHGELLESIFLKESSAEASIPSPDDPIEELTIDDIDIDDDEVPLSPPPASSSTSHVHK
KTTVEDERAKLFEGSSAADKPRMRSTQEILTKYKFGGDAAAAAAHAKDKLMQRQEKLERI
SLRTQELQDGAENFASLAQELAKNMENKKWWKL
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggaagcgcctcttgaagaaggtgctgcagcagcgaaggaatggaggaggacca
ggagggggagcaggagcaggagaggtggcgcagctggacgcgcagatcgcgcttcactac
ggggtcccctacgccgcctcggtcatggggtttgatccagtgcagcggcttctcgccgtc
gggacgctggatggcaggataaaaatctttgggggtgataatatcgaaggcctcctcata
tcgccaaagagtgtgccatacaagtatttgcagtttatacaaaaccagggactactggtt
gcagtttctaacgagaatgaaatccaggtatggaatctcgaattcagacaactatttcat
ttttcccagtgggacgtcaacataactgcatttgcagtcatagaggagaccttttttatg
taccttggagatgaaaatggcctgctttctgttctgaagtatgatgtagatgatgggaag
cttctaaggatgccttacaatgttactatacattccttaagtgaagcagctggtgtttcc
ttgcttgatactcaacctatcgttggaatattgcctcaaccagacaccttgggcacgagg
gtgctaattgcatttgagagaggattgttagttctttgggacatatcggaggaccgtgca
attgctgttcgcggctatggggacttacacatgaaaggtcaagtcagtggcgctcaaaca
gatgctactgaacatcaaatagataatgttgatgagactgaagaagagagagaaatttgc
tcactttgttgggcatcaagagggggttcaactgttgctgttggctatataaccggagac
atacttctatgggatatgacagtatcctctagacaaggaaagcaaactgatgtttcatct
aatgttgtcaagctgcagctggcttctggaagtcgtaggcttcctgttattgtcttgcac
tggtctgccgggtcagcaaaagatactactaaaggcggtcatctttttgtatacggtggt
gatgatatggggtctgaagaagttctgacggttcttagcctggaatcatctaatggatta
gagtcagtaagatgcgcgtcacgtggggacctcaaacttgatggatcttttgctgatatg
attcttattccagatactggggttccagataaaatacgagcttctgcactttttgtattg
acgaatcctggacaattgaatttctatgatggtagtgctctattttctggacggaaatca
gaagaggtatatgctcagcctgaggctcggaaatttccagttgcagttcctacaattgat
cccaacataaccgtcacggatctgtattcactaactggaacagggcatccaagtatttca
ctgaagaaattttgtgcgaggcaaagtgtcacacatccgatatcagggaatatgaaatgg
cctttgactggtggggttcctagtgaaatgtcacagaaggaagatcgtgcggttgaaaga
atatatgttgcaggctatcaagatggttctgtgagaatatgggatgcaacttttcccatt
ctagtgccaatgtttgtattggatgcaaaggtgtctgatattattttggatggagcaaat
gcttctgtatcatcgctggcgttttgttcattaaccttgactttcgctgttggcacaaca
agtggtctggtgcgcatgtataaacttcatgagcatactggggattctagctttcacttc
gtgagtgaatctaaacaggaagttcatgctgttcatcatgggagaggattccattgtcat
gttgcctttatggcatcaaattcccctgtgcgatccctcagatttacaggttcaggcgag
gtccttgcagtaggatatcaaaatggtcaggtgggcatgtttgatgcaagtcaactgtca
atgatgttctgtgtggattgcgcatcaggaacaaattctcctgtggtctcactaagcatc
tatggtgttgtttcatctgctgcagaaggggaccagtcccagaaagagattgctaaaagt
ggaaaaaattccacagatgttctactttccttaactaaggatgcacgtcttactgtaatt
gacagcactagcggtctggtaataaattcacatctgttagatcagaagcaattgtctgca
gtttcgatgtatgtcatagatgtagcttcagatgaggagcaaacacaatcatcaggagac
aaatccccgcctcaaagtcagacaggaaaagaacaaaacgatcttgaccaaaaacaagca
caaggagccgaaactaaccagaaaaaggcttctcaacattcacacagtggtgattcaaat
tctcttcttttggtctgctttgaggatgaagcgcttttattttctctgacatcattgatt
cagggaagcaacaagcatctagataaaataaagctcgcaaaacactgctgctggtcagcc
attttcaagaataaggatgataaagcttgtggactgatattagcttatcagacagggatc
atagaattgagatctttgccagacctagagattcttgctgagagctccttgatgcattta
ttaagatggagttacaagacaggcatggataagtccatgagctccttaaatggacaaatt
gctatggtaaatggatctgaatttgcaatcatctctcttatagcctcggagaatgacttc
aggattccagaatcttggccatgccttcacgataaagtacttgcagcagccgctgaagca
gctagtagcatctcgacagaccagaaaagaaagcagaatccagcaggagttcttggtggc
atcattaaaggattaaaaggcaaagcagacgaaaatgcgaacctgagaagaagtttcaat
gcgcaaacccacggagaactgttggagtcaattttcttgaaagagtcatctgctgaagca
tcaatacccagtcctgatgatccaatagaagaactgacaattgatgacatagacattgat
gatgatgaagtacccctttcccctccaccagcatcatcctctacatctcacgtgcataag
aaaacaacagtagaggacgagagagcaaaactgtttgaaggatcaagtgctgctgacaaa
ccgagaatgagaagtacccaagaaattcttaccaaatataagtttggcggggatgcagcg
gcggcagctgctcatgcaaaagacaagctcatgcagaggcaggagaaactcgagagaata
agcctgcggactcaggagcttcaggacggagcggagaacttcgcgtccctcgcccaggag
ctcgcgaagaacatggagaacaagaagtggtggaaactataa
DBGET
integrated database retrieval system
