Lolium rigidum (rigid ryegrass): 124674225
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Entry
124674225 CDS
T09103
Name
(RefSeq) autophagy-related protein 13a-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
124674225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124674225
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124674225
Membrane trafficking [BR:
lrd04131
]
Autophagy
Autophagosome formation proteins
ULK complex
124674225
Atg1 complex
124674225
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124674225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
124674225
NCBI-ProteinID:
XP_047066219
LinkDB
All DBs
Position
7:complement(85511491..85520703)
Genome browser
AA seq
520 aa
AA seq
DB search
MSSMSDSGGGGRAGAELMAEQFHLKVLHAVLAVRSPRPLAAPAPPAAASASFRRRDRWFH
LPLHDPPPPPSAERLEAPAPGEPLVVDIHLAPAGNGGAGGEVVERWTVACEPWPDAAAAG
EGIAVNRAYKRCMTLLRAVYATLRLLPAYRVFHVLRRASDSYNYEMGYRVGSFAVPFSRD
QEAAMRSRRFVPVDTQPGRLVVSVQYLSSLAGFKLEISSLSPSMLIPNYAVSPAAEPMRA
FPASLTEATGSAFPQSYQHHQRPHSWAQPALWPHAPAQQTRFSPPPLHYASPTPSPPNFP
GGYLQSPLRGRGESAPMTIPGERRSPVHRQNMLDPMLPPPSPRRGDKGAAGSQESPSDIS
RSFGRLRIGDQYGSLSPGSKGKDSKDESGRFSALSSCDSPRQDDLDDADYPFAVDDVDPP
ISRPGSSDGKEARDQSGSSSHKSQDAAVGSLVNLLKSARPLRDSSYSSQSGAESNVAGST
SSGMSRRTSDALEELQSFKAIRERLLSGSRAKDGQSPETP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatgtcggactcggggggcggcggccgcgcgggcgcggagctgatggcggag
cagttccacctcaaggtgctgcacgccgtcctcgccgtgcgctccccgcgcccgctcgcc
gcgccggcgccgcccgcggccgcgtcggcgtcgttccgccggcgcgacaggtggttccac
ctcccgctccacgacccgccgccgcccccttccgccgagcgcctcgaggcgccggccccc
ggggagccgctcgtggtggacatccacctggctcccgccggcaacggcggcgccggcggg
gaggtggtggagaggtggacggtcgcgtgcgagccctggccggacgccgcggcggcgggc
gaggggatcgccgtgaaccgggcgtacaagcgctgcatgaccctgctgcgggccgtgtac
gccacgctccgcctgctgccggcgtaccgcgtcttccatgtcctgcgccgcgccagcgac
tcgtacaactacgagatgggctaccgcgtcggctccttcgccgtgcccttctcgcgcgac
caggaggccgccatgcgctcccgccgcttcgtccccgtcgacacgcagcccggccgtctc
gtcgtctccgtgcagtacctctccagcctcgccggcttcaagctggagatctcctccctc
tcgccctccatgttgatccccaactacgcggtcagcccagcagctgagcccatgcgcgcc
ttccctgcttcgctcacggaagccacgggctctgctttcccacagtcctatcagcatcat
cagcgcccgcacagctgggcgcagcctgcgctctggccccatgcgccggctcagcaaacc
agattctcgcctccgccattgcattacgcctcaccaacaccatcgccccccaacttcccc
ggtggctacctgcagtcacctctgagggggagaggggagtctgcaccgatgaccataccc
ggcgagagaaggagccccgtgcaccgtcagaacatgctggacccaatgctgccaccgcca
tctccgaggagaggagacaagggggcagcaggttcacaagagtcgccatcagatatcagc
cgctcattcgggagacttcggattggggatcagtatgggagcttgtcaccaggatccaag
ggcaaggacagtaaagatgaatctggaagattctctgcactctcctcgtgtgattcacct
cggcaagatgatctagatgatgccgattatccttttgctgtagatgatgtcgatccacca
atctctcggcctgggagcagtgatggaaaagaagctagagatcagtcaggctcgtcgtca
cataaatcacaagatgcggcagttggctctctggttaatttgctgaaaagtgcacgcccg
ctgcgagattctagttattcgtcccagtcaggggctgagtcaaacgtggcaggctcgacc
agttctggcatgtctcgtagaacatctgatgcacttgaggagctccagtcttttaaagca
atcagagagagactgctgtccgggagcagagcaaaagatgggcagtcaccggaaacacca
tag
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integrated database retrieval system
