Lolium rigidum (rigid ryegrass): 124674282
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Entry
124674282 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124674282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124674282
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124674282
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
124674282
NCBI-ProteinID:
XP_047066277
LinkDB
All DBs
Position
7:277354126..277356990
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AA seq
240 aa
AA seq
DB search
MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGDVVDIYIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDRLDGRLVDGREMMVQFAKYGPNAERIQKGRIMEMLPRSRGRSRSR
SPRRGYRDDHRGRDYSRRRSRSPSRERYGRDRHTERDYHHRSRSRSYSPDDYRRRGRDRS
PSRSRSRSYSPEDDNRRGRASVSPARRSPSRSPRRTPSSREGSPVKRNEDRSPRSRSPST
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcttcggacgctccggcccgccgccgatccgcgacacctactccctcctcgtc
ctcaacatcaccttccgtacgacggctgacgacctcttcccgctcttcgacaagtacggc
gacgtggtcgacatctacatccccagggaccgcaggactggcgactcgcgagggttcgcc
ttcgtgaggtataagtacgaggacgaggcgcagaaggcagtcgatcgactggacgggagg
ttggtagacgggagggagatgatggtgcagtttgccaagtacggcccgaacgctgagcgg
attcaaaaagggagaatcatggaaatgctcccaaggtcaaggggtcgttccagaagccgc
agtccaagacgggggtaccgcgatgatcatcggggcagagattattcgagaaggcgaagt
cggagtccgagtagagagcgatatggacgtgacaggcacacagagagggattatcatcat
cgtagcaggagtcgcagctacagtcctgatgattacaggaggcgtggcagggacagaagc
cctagtcgtagcaggagtcgcagctacagtcctgaggatgacaacaggcgtggcagagcc
agtgtgtcgcctgcgcgtagaagccctagtcgttcacctcgcaggacgccatcttctcgt
gagggatctcctgttaagcgcaatgaggaccgatctccacgctctcgtagcccttcaaca
taa
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