KEGG   Lolium rigidum (rigid ryegrass): 124674493
Entry
124674493         CDS       T09103                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    124674493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lrd03009]
    124674493
Ribosome biogenesis [BR:lrd03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    124674493
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Utp13 Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_IP5PC_F WD_LRWD1 Ge1_WD40 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd WD40_like Cytochrom_D1 UTP15_C Polysacc_lyase-like
Other DBs
NCBI-GeneID: 124674493
NCBI-ProteinID: XP_047066493
LinkDB
Position
7:59185258..59192130
AA seq 926 aa
MALSLGPKKNYRCDRSLQQFYTGGPFAVGTGADADAEAFLACACGSDLRVVSAADASAIG
DPIDGDSEAVTALALSPDSRLLFAAGHSRLIRVWDLASRTCIRSWKGHDGPVMAMACHAS
GGLLATAGADKKVCVWDVDGGFCTHFFRGHTGVVTTIMFHKDPKRLLLFSGSDDGDVRVW
SLESKKCIAVLKAHLSTVTSLALSEDGQTLLSAGRDKVVTVWDLRKYSSKKTITAYEMIE
GVSFIGPGSGFLACLGVEPANLKEKANGYCLTVGERGVVRIWCLESAVCVFEQKSSDVTI
NSENEESRRGFTATVMLPDDQGLLCVTADQEFLFYSCTRTDEGTFQLNLYKRLIGYNDEI
LDLKFVGEEEQYLAVATNLEQVRVYDVASMSCSYVLAGHTEIVVCLDTCVSASGKKLVVT
GSKDNTVKLWDMEKRSCIGTGKGHLGAIGCVAFSKKSKNFFVSGSSDRTIKVWTWDDALI
DANGEVPLKAKAGVAAHDKDINSLSISPDDGLVCSGSEDRTACIWKLPNLVSSVVLKGHK
RGIWSVEFSPVERCVITSSGDRTIKIWHVPDGSCLKTFEGHTSSVLRASFLSRGTQFVSC
GSDGLVKLWTIKTNECIATYDKHDGKVWALAIGRKTEMLATGGTDSDLNLWHDCTLEDKQ
EDFLKKEEEVLRGQELENAVSDSDYTKAIQLAFELRRPRRLLELFSQLCRKADPEDPIEK
ALHGLPKEGLRVLLEYIREWNTKPKFCHVAQFVLFRVLRSFPPTDIVEIKGISELLEGLI
PYSQRHFSRVDRLVRSTFLLDYTLTRMSVVDPDVVDAGTTRDVTNDLSVENGKILPEEPA
QESPEKPGKKRKSSKKGSNVVSVDIDVVDVGTARDVTNDSSVGNREILPEEPAQESPEKP
GKKRKSSKKGSKKVKTSSSNVVSVEA
NT seq 2781 nt   +upstreamnt  +downstreamnt
atggctctgtcgctggggcccaagaagaactaccgctgcgaccgctcgctgcagcagttc
tacaccggcgggcccttcgccgtcgggaccggcgccgacgccgacgccgaggccttcctc
gcgtgcgcctgcggcagcgacctgcgcgtggtgtccgccgccgacgcctccgccataggg
gaccccatcgacggcgactccgaggccgtcacggcgctcgccctctcccccgactcccgc
ctcctcttcgccgccgggcacagcaggctcattagggtctgggacctcgcgtcacgcact
tgcatccgcagttggaaggggcatgatggtcctgttatggccatggcatgccatgcttct
ggtgggctgcttgcgaccgccggagcagacaagaaggtgtgcgtgtgggatgtagatggt
ggattctgcacgcatttttttagaggccacacaggggttgtgacaaccataatgttccat
aaagatccaaagcgccttctgttattttcaggaagtgacgacggcgatgtgcgagtttgg
agccttgaaagcaaaaaatgcattgctgtgcttaaggcgcatttgtcaacagtgacttcg
ttggcattatcagaagatggccaaacattgctcagtgcagggagggataaggttgtgact
gtgtgggatcttcggaagtatagctcaaagaagacaataacggcttatgaaatgatagaa
ggtgtttccttcattggaccaggaagtggcttcctggcttgtctgggcgttgaaccggca
aatttgaaggaaaaagcaaatggttattgtcttacagttggtgaacgtggagttgtgcgc
atatggtgcttggaaagtgctgtgtgtgtatttgagcagaagtcatccgatgtaaccatc
aactcagagaatgaggaatcaagaagaggctttacagctactgttatgctgccagatgac
caaggattgctatgtgtcactgctgatcaagaatttttgttctattcttgtacaagaact
gatgaaggaaccttccagttgaacctatataaacgtctaataggttataacgacgagatt
cttgatttgaagtttgttggggaagaggaacagtaccttgctgtagccactaacttagag
caggtccgtgtttatgatgttgcatcaatgtcatgttcttatgtgctggctggccacact
gaaattgttgtttgccttgacacctgtgtctctgcttctgggaagaaacttgttgtaact
ggaagcaaagataatactgtaaagttgtgggatatggaaaagagaagctgcattggtacc
ggcaaaggccatctaggagctattggttgtgttgctttctcaaagaaatcgaagaacttt
tttgttagtggcagcagcgaccgaaccatcaaggtttggacttgggatgatgcgctgatt
gatgccaacggtgaagttcctctcaaagcaaaggctggtgtagctgcacatgataaagat
attaattctctgtccatctcacctgatgatggccttgtttgcagtggttctgaggaccga
acggcatgcatttggaaactcccaaacctagtgtcctctgttgtccttaaagggcataaa
aggggcatttggtcagttgagttttctcctgttgaacgatgtgtcataacatcatccggt
gacagaacaatcaaaatatggcatgttcctgacggctcatgcttgaagacatttgagggt
catacatcaagtgttttgagagcatcattcctttcacgtggaactcagtttgtttcttgt
ggaagtgatggtttagtgaagctatggacaataaaaacaaatgaatgcattgctacttat
gacaagcatgatgggaaggtttgggcattggctattggtaggaaaactgaaatgcttgct
actggtggaactgattcagaccttaacctttggcacgattgcacgttggaagataagcag
gaagatttccttaaaaaggaggaggaagtcttaagaggccaagaattggaaaatgcagta
tcagattctgactacacaaaagcaatacaactcgcatttgagcttagaagaccgcgcagg
cttcttgagttattctcacagctctgcaggaaagctgatccagaggaccctatagaaaaa
gcccttcatggtctcccaaaggaagggcttcgcgtgcttctcgagtatatacgtgaatgg
aatacaaagcccaagttttgtcatgttgcacagtttgtgctttttcgggtgttgaggagc
tttcctcccactgacatcgtggagataaaaggcatcagtgagctactcgagggcctcatt
ccatactcgcaaaggcacttcagcagagttgataggctagtacgcagcacatttttgttg
gactacaccttgacccggatgtctgtcgttgacccagatgtagtagatgcgggcacaacc
agagatgttacaaacgatttatcagtggagaatggtaaaatcctgccggaagagcctgca
caagagagccctgaaaagccgggcaagaaaagaaaatcaagcaagaaaggtagcaacgtt
gtttctgtcgacattgatgtagtagatgtgggcacagctagagatgttacaaacgattca
tcagtggggaaccgtgaaatcctgccggaagagcctgcacaagagagccctgaaaagccg
ggcaagaaaagaaaatcaagcaagaaaggtagtaagaaggtgaagacttcttccagtaac
gttgtttctgtcgaggcttaa

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