Lolium rigidum (rigid ryegrass): 124674545
Help
Entry
124674545 CDS
T09103
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124674545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124674545
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
124674545
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124674545
Multi subunit type E3
ERAD complex
124674545
LMBR1L-GP78-UBAC2 complex
124674545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
CUE
zf-RING_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
E3_UbLigase_EDD
zf_RING_Vps8_fungal
zf-RING_Vps41
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
124674545
NCBI-ProteinID:
XP_047066545
LinkDB
All DBs
Position
7:233365289..233375619
Genome browser
AA seq
566 aa
AA seq
DB search
MAVNCLYVAAASTAASAAALQWWAASLLDGDADAAAADGDWLHTLLRSHVTVALLANLAA
HLFLLIVIALKTLFFVQLTSSETRKVLEHIINYVIYKGTFLPLVVPPNSQQIILWSTWLV
LLCSLKMFQSLARERLERLNASPSATPSKYLRVYSALLFVLSTDLLWMKLCVGFCRACNS
KLFWLMFFEPLSIAFESLQSIMVHGFQLFDIWQRHLMDSGVDYLDFQKTYKQAAGSFSEW
RGKVIRNFGFVIDLMSLLMSLGHYSMIFWLRGMAFHLIDAVLILNLRALVISFLKRIKTY
IKLRKALRSLDGALPDATYDEICTYDDECAICRGPMARAKKLSCNHLFHLPCLRSWLDQG
LMEGYSCPTCRRPLFLSSQGHTRTATTEVANVQLIAEQLNMGLNQQRVPGHEHPVEQQNP
SDAVWRGAGLDSSWVPPWSSPGMDDPSSSSAVRSVGLTGVQMMMRQFASVSDNYGRTDAT
WNLWPEAMAGPSIVPASSSRPDGASAAGLRFRGATAGTINGSTSQINSMVDRVREVLPHM
PDELILEDLMRTNNVNATVNNLLLMQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaactgcctctacgtcgccgccgcctccacggccgccagcgccgccgcgctg
cagtggtgggccgcctccctcctcgacggggatgccgacgccgccgccgccgacggggac
tggctccacaccctgctgcgctcgcacgtcaccgtcgcgctgctagcgaatctcgccgcg
cacctcttcctcctcatcgtcatagccctcaagactttattttttgttcagttaacttct
tcagagactagaaaagtgctggaacacatcattaactatgtaatttataagggaactttt
ctcccattggttgtgcctcctaattctcaacaaataatcctttggtcaacttggttggtc
cttctttgttcactgaagatgttccaatcattggccagagaacgtcttgagcgcctcaat
gcttcaccctcagcaactccatcaaaatatctccgtgtatattctgcattgttgtttgtt
ctttcaactgatctactatggatgaagctttgtgtagggttctgcagggcatgcaattct
aagttattttggcttatgttctttgagccacttagtattgcctttgagtcattgcagtct
atcatggtgcatggatttcagttgtttgacatttggcagcgacatctgatggacagcggt
gtggactatctggatttccagaagacttataaacaagcagcaggatccttttctgagtgg
agaggcaaagttatcaggaattttggttttgtcattgacttgatgagcttgttgatgtca
cttggtcattattcgatgatcttttggctccgtggtatggcgtttcacctgattgatgca
gttctcatattgaacttgcgtgctcttgtaatttcatttttgaaaaggatcaagacgtac
attaagttaagaaaggcacttcgttcgctggatggagcacttccagatgctacatatgat
gaaatctgcacatatgatgatgagtgtgccatctgccggggaccaatggctcgagctaaa
aagttgtcctgcaaccatctatttcatcttccttgcttgcgatcttggttggatcaagga
ttaatggagggttactcttgtccaacttgtcgaaggccactctttctttcatctcaaggg
catactaggactgcaacgacagaggtagcaaacgttcagctaattgcggaacagctaaat
atgggtttaaatcagcagagggttcctggtcatgaacatcctgttgaacagcagaatcct
tcagatgctgtttggagaggtgctggtcttgattctagctgggtaccaccgtggtcgagc
cctggaatggatgatcccagttcatccagtgcagtgagatctgtggggcttaccggagtt
caaatgatgatgaggcagtttgcttctgtgagtgataattatgggcgtacagatgccacc
tggaatctatggcccgaggcaatggctggcccttcaattgttccagcgtcttcctcgagg
cctgatggtgcttctgctgctggcttgcggttccgaggagctactgcaggaacaattaat
ggaagcacgtcgcaaattaattcaatggtagatagagtacgtgaggttttaccccacatg
cctgatgagctaattctggaggatctgatgagaactaataacgtgaatgccactgtgaat
aatcttctgctgatgcagtga
DBGET
integrated database retrieval system
