Lolium rigidum (rigid ryegrass): 124674573
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Entry
124674573 CDS
T09103
Name
(RefSeq) nuclear poly(A) polymerase 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124674573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124674573
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
124674573
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
124674573
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
MTPAP-like_central
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
124674573
NCBI-ProteinID:
XP_047066573
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Position
7:complement(318112201..318117540)
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AA seq
528 aa
AA seq
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MAPDLPVWAYAAAPAPAPEAPQTLPVFHAPPPPPPPPLPAGYHLLPPFSLAFQVPSTLLF
EMDSRRSSSLRQFLEDEGAVPTPEEDMTREQVIRKLKEIVMEWAKAVGFEQRVPPRRVTA
TVLTYGSYTLGAHGPESDIDALCVGPCIANLPHHFFVVLRQILQRRPEVSGLQTVENAKV
PLMRFTFSGISVDLTYAQLHVIDAVQAINSSSPQFLRRLDARSLRSLSGVRVNEQIVQLV
PNAETFQVLLRCIKLWARRRGLHCHLLGFFAGIHLAILAAYVCQKYPNASVNGLFTMFFE
IFANWPWQIPVDLHGQPFKCRRPDGCLMPIVMPCTPPELCVSNMTAGTFRKIREELMRGY
TLTKDLWRHDFEWTCLFEPFPYVPTYKYFLRIALCASTSEELQDWAGWVKSRFRYLILKL
ESNGIECDPDSSQEIDHTVIKPNIVYHWGLISHTFTRLDISSLKEDFMKNVINDVYGNVK
CTHSELTMSLVEQSELPKSMYGDSLYSWNLPMHMVGYQVATDCWTAVG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggacctcccagtctgggcctacgccgccgccccggcgccggcccccgaggcg
ccgcaaaccctacccgtcttccacgccccgcctccgccgccgccgccgcctctccccgcg
gggtaccacctgctccctcccttctcgctcgccttccaggtcccgtccaccctcctcttc
gaaatggattcccgccggagcagctccctccgccagttcttggaggacgagggggccgtc
ccgaccccggaggaggacatgaccagggagcaggtcatccgcaagctcaaagagatagtc
atggagtgggccaaggcggtgggcttcgagcagagggtgcccccgaggcgggtcacggct
acggtcctcacctacggttcttacacgctaggggctcatggacctgagtctgacatcgat
gcgctctgtgtcggtccatgtattgcaaatttgccgcaccacttttttgttgttctgcga
caaattcttcagcgcaggccggaagtgtcaggactgcagactgtagaaaatgcaaaggtt
ccattgatgcgattcacattcagcgggatttcagttgatctgacgtatgcccagctccat
gttattgatgcagttcaggctataaattcatctagtcctcagttccttcgaagacttgat
gcacggagcttgaggagtctatctggagttcgcgttaatgagcaaattgtgcagctagta
ccgaatgctgagacgttccaagttctgttgcgatgcataaaactatgggctaggaggcga
ggacttcattgccatctgcttggtttctttgctgggattcatttggcgattcttgcagca
tatgtttgtcagaaatatcctaatgcctctgtcaatggtttgttcaccatgttctttgag
atatttgctaactggccttggcaaattccagtagacctgcatggtcagccatttaaatgt
aggcgtccagatgggtgtttaatgcccatagtgatgccttgtactccaccggagctctgt
gtgtctaatatgacagcaggtaccttcaggaagatcagagaggagcttatgcgtggttat
actttgacaaaggacttatggaggcatgattttgagtggacatgcctttttgaacccttc
ccatatgtgccaacatataagtattttcttcgcattgctctatgtgcttcaacttctgaa
gaactacaggattgggctggatgggtgaaatcccgcttccggtaccttattctgaagctg
gaaagtaatggcattgagtgtgatcctgattcgtcacaggaaattgatcatacagtcatc
aagcctaacattgtatatcactggggccttatctctcatacatttactcgccttgacatt
agctctctgaaagaagatttcatgaaaaatgtcatcaatgatgtctacggaaacgtgaaa
tgtacacattcagagctgacaatgtcccttgttgagcaatcagagctgccaaaaagtatg
tatggtgactcattgtactcctggaacctgccgatgcatatggtgggctaccaggtagca
actgactgttggactgcagttggctag
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