Lolium rigidum (rigid ryegrass): 124674590
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Entry
124674590 CDS
T09103
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124674590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124674590
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124674590
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
124674590
NCBI-ProteinID:
XP_047066586
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Position
7:188262530..188267490
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AA seq
484 aa
AA seq
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MANLADSFLADLDDLSDNEAYPEEDNAEAAGVDEDGDDDMLDLEALNYDDLDSVSKLQKT
QRYIDIIQKVEGALEKNIDLSNQGFILEEDPEYQLIVDCNALSVDIENELIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
SEENLVKTVEACDRALNLDAAKKKVLDFVEGRMGYIAPNLSAIAGSAVAAKLMGIAGGLG
ALAKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEHTEVFQSTPPALRTRACRLIAAKS
TLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRL
RKMKERYAVTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGRLRVSAAQNKLAAK
VAKKFKEKSYGSSGTTSGLTSSLAFTPVQGIELSNPQAHGNHLGSGTQSTYFSETGTFSK
ISRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccttgctgattctttcctggccgatcttgacgacctgtcagacaatgaagcc
tatcctgaagaagacaatgctgaggcagcgggtgtggatgaggatggtgatgatgacatg
cttgaccttgaggccctaaattatgatgatctagacagcgtctcaaagctgcagaagacg
caacgttatattgacataatacaaaaagtcgaaggagcacttgagaaaaacatagactta
tctaatcaaggattcattctagaggaggatccagagtaccagcttattgttgactgcaat
gctttatcagtagatattgagaatgagctcattataatccacaatttcatacgcgacaag
tataggctgaagtttcctgagctggaatcccttgttcatcatccgattgattatgcccgt
gttgttaagaagattggaaatgagatggatttaaccctggtagatctggaagggctttta
ccttctgcagttataatggttgtctccgttacagcatcaacaactagtgggaagcctctt
tctgaggagaatttggtgaaaacagttgaagcatgtgacagagccctaaatcttgatgcc
gcaaagaagaaggtgcttgattttgtagagggtagaatgggttacattgcaccaaacctc
tctgccattgctggcagtgctgttgctgcaaagctgatgggaattgctggtggtttggga
gcacttgcaaaaatgcctgcttgcaacgttcagttacttggagcaaaaaagaaaaatctt
gctgggttttctagtgccacatctcagtttcgtgttggctatcttgaacatacagaagta
tttcagagcacccctccagccctgaggacacgtgcttgcagacttatagctgcaaagtca
actctagcagcaaggattgattcaattagaggcgatccaactggaaaagctggtcggaac
ttgttagaagaaatccgtaagaagattgagaagtggcaagaaccacctcctgcaaagctt
ccaaaaccacttcctgttccagactctgagcctaaaaagaagagaggcggtcgccgtctt
cgaaaaatgaaagaaagatatgcggtgactgatatgatgaagcttgcgaaccggatgcag
tttggtatcccggaagagagctcattaggtgatggcttgggagaaggttatggcatgctc
gggcaggctggaagtgggagactacgtgtctcagctgcacaaaacaaacttgctgctaaa
gtggccaaaaaattcaaggagaagagctatggtagcagtggcacgacatctggattgaca
tctagtttggcctttacaccagttcagggaatagagctgtcgaacccacaggcccatgga
aaccaccttggaagtggaacccagagcacctatttctctgagaccggcacattctcgaag
atcagtaggccctga
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