Lolium rigidum (rigid ryegrass): 124674675
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Entry
124674675 CDS
T09103
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124674675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124674675
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124674675
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
124674675
NCBI-ProteinID:
XP_047066677
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Position
7:189224608..189229149
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AA seq
484 aa
AA seq
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MANLADSFLADLDDLSDNEAYPEEDNAEAAGVDEDGDDDMLDLDALNYDDLDSVSKLQKT
QRYIDIIQKVEGALEKNIDLSNQGFILEEDPEYQLIVDCNALSVDIENELIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
SEENLVKTVEACDRALNLDAAKKKVLDFVEGRMGYIAPNLSAIAGSAVAAKLMGIAGGLG
ALAKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEHTEVFQSTPPALRTRACRLIAAKS
TLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRL
RKMKERYAVTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGRLRVSAAQNKLAAK
VAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHGNHLGSGTQSTYFSETGTFSK
ISRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccttgctgattctttcttggccgatcttgacgatctgtcagacaatgaagcc
tatcctgaagaagacaatgccgaggcagcgggtgtggatgaggatggtgatgatgacatg
cttgaccttgacgccctaaactatgatgatctagacagcgtctcaaagctgcagaagact
caacgttatattgacataatacaaaaagtcgaaggagcacttgagaaaaacatagactta
tctaatcaaggattcattctagaggaggatccagagtaccagcttattgttgactgcaat
gctttatcagtagatattgagaatgagctcattataatccacaatttcatacgtgacaag
tataggctcaagtttcctgagctggaatcccttgttcatcatccgattgattatgcccgt
gttgttaagaagattggaaatgagatggatttaaccctggtagatctggaagggctttta
ccttctgcggttataatggttgtctccgttacagcatcaacaactagtgggaaacctctt
tctgaggagaatttggtgaaaacagttgaagcatgtgacagagccctaaatcttgatgcc
gcaaagaagaaggtgcttgattttgtagagggcagaatgggttacattgcaccaaacctc
tctgccattgctggcagtgctgttgctgcaaaactgatgggaattgctggtggtttgggg
gcacttgcaaaaatgcctgcttgcaacgttcagttacttggagcaaaaaagaaaaatctt
gctgggttttctagtgccacatctcagtttcgtgttggctatcttgaacatacagaagta
tttcagagcacccctccagccctgaggacacgtgcttgcagacttatagctgcaaagtca
actctagcagcaaggattgattcaattagaggtgatccaactggaaaagctggtcggaac
ttgttagaagaaatccgtaagaagattgagaagtggcaagaaccacctcctgcaaagctt
ccaaaaccactacctgttccagactctgagcctaaaaagaagagaggcggtcgccgcctt
cgaaaaatgaaagaaagatatgcggtgactgatatgatgaagcttgcaaaccggatgcag
tttggtatcccggaagagagctcattaggtgatggcttgggagaaggttatggcatgctc
gggcaggctggaagtgggagactacgtgtctcagctgcacaaaacaaacttgctgctaaa
gtggccaaaaaattcaaggagaagagctatggtagcagtggcgcgacatctggattgaca
tctagtttggcctttacaccagttcagggaatagagctgtcgaacccacaggcccatgga
aaccaccttggaagtggaacccagagcacctatttctctgagaccggcacattctcgaag
atcagtaggccctga
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