Lolium rigidum (rigid ryegrass): 124674754
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Entry
124674754 CDS
T09103
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124674754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124674754
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124674754
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124674754
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124674754
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124674754
Messenger RNA biogenesis [BR:
lrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124674754
Chaperones and folding catalysts [BR:
lrd03110
]
Heat shock proteins
HSP60 / Chaperonin
124674754
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124674754
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124674754
Exosomal proteins of other body fluids (saliva and urine)
124674754
Exosomal proteins of breast cancer cells
124674754
Exosomal proteins of colorectal cancer cells
124674754
Exosomal proteins of bladder cancer cells
124674754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
124674754
NCBI-ProteinID:
XP_047066763
LinkDB
All DBs
Position
7:97425641..97429811
Genome browser
AA seq
590 aa
AA seq
DB search
MSRMPLPPPSPPPSLSSKGPTLPFSPKKSPPMPVYKDLHFNRDLSATKKLQVGVDLVARL
VGVTLGPKGRNVVLGNKYGPPKIVNDGETVLKEIELEDPLENLGVKLVRQAGARTNDIAG
DGCTTSIILAQGLIAEGMKVLAAGMNPVQIARGIGKTSDALVSELKLMSREIEDHEIVHV
AAVSAGNDYSVGNMISDAFKRVGREGMVRIENGRGIENSLEIVEGMQFERGYLSPYFVTN
HASMSTEFTDCKILLVDKIISDPRELLRVCFSAVKEDFPLLIIAEDVEEEALATLTRNKL
SGMVKVAATKAPSFGEQKTQCLEDIAIITGGTVVREDMGYTLEEAGKEVLGFASKVVIKN
DSTLIVTDGSTLHAVEKRVAQMKGQIENSKERYQKKILGERIARLCGAIAIIQVGAQTVI
ELKDKKLRIEDALNATMAAIEEGVVVGGGCSLLRLSKKIDIIKESLDNAEQKIGADIFKN
ALSYPTTLIANNAGMSGKFVVEKVLSNDNISYGYNAANGSYEDLMAAGILDPTKVVRCCI
EHAAVVAKSFLTSDVVIVEAQESKPVRVRPPMPPRNLIPPIPASVSGIRV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggatgccgcttcctcctccttctcctcctccctccctctccagcaagggccct
accctgcccttctcccccaagaagtccccgccgatgcccgtgtacaaggacctccacttc
aaccgcgacctctctgccaccaagaagttgcaggtaggcgtggacctggtggcgcggctg
gtcggggtgaccctggggcccaaggggaggaatgtggtgctcggcaacaagtatggccct
cccaagatcgtcaacgatggggagacggtcctcaaggagatcgaattggaggacccgttg
gaaaatctaggagttaaattggtcaggcaggccggcgccaggacgaacgatattgctggt
gatggctgtaccacttctataatccttgctcaaggcctgattgctgaaggaatgaaggtt
cttgctgctggcatgaatccggtccagatcgcccgtggcattgggaagacttctgatgct
ttagtttctgaacttaagttgatgtcacgggagatcgaagaccatgagatagtgcacgtg
gctgcagttagcgctggaaatgattactcggttggaaacatgatttcggatgctttcaaa
agagtgggcagggaaggcatggttagaattgaaaatggaagaggcattgaaaacagttta
gagatcgtcgaaggaatgcaatttgaacgtggttacctctcaccttattttgtgactaat
catgctagtatgtccacggagttcactgactgtaagatcctgttggttgacaagataatt
tctgatccacgggagctcttaagagtatgctttagtgctgtaaaggaagattttccattg
ttaataattgccgaggacgtcgaagaagaagcattggctactttgaccagaaacaagcta
tcgggtatggtcaaagtggctgcaactaaggccccttcttttggagaacagaaaacccaa
tgtttggaggacattgcaatcataacaggaggtacagtagtgagagaagacatgggatac
acactagaagaagcagggaaagaggttttaggttttgcttctaaagtggtaataaaaaat
gattcaacgctgattgttactgatggaagcaccctccatgcagttgagaaaagggttgct
cagatgaaaggccaaattgagaactcaaaggagaggtaccagaaaaagatactgggtgag
aggattgcaaggctatgtggtgcgattgcaatcattcaggtcggtgctcaaacagtcatt
gagctcaaagataagaagctgagaattgaagatgcccttaacgcaaccatggcagctatt
gaggaaggtgttgtagttggtggtggatgtagcctattgagattatccaagaaaattgac
ataatcaaggaatcattggataatgcggagcagaagattggtgctgacatcttcaaaaat
gccctgagctaccctaccacactaatagcaaacaatgccggtatgagtgggaagttcgtt
gtcgaaaaggtactttcgaatgacaatataagttatggctacaatgctgccaatggctcc
tacgaggacttgatggctgctggaatattagacccaacaaaggttgtgaggtgttgcata
gagcatgctgctgttgttgccaagtcttttctgacctcagatgtggtgatcgttgaggca
caagagagcaaaccggttcgtgtaaggcccccaatgccccctaggaacctgattccccca
atacctgcatcagtttcaggtattcgagtgtag
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