Lolium rigidum (rigid ryegrass): 124675039
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Entry
124675039 CDS
T09103
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124675039
03041 Spliceosome [BR:
lrd03041
]
124675039
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124675039
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124675039
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_8
RRM_5
RRM_DEAH11
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
124675039
NCBI-ProteinID:
XP_047067056
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All DBs
Position
7:275798291..275802769
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AA seq
425 aa
AA seq
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MLPQQQQNQAAALMQQAAALQSMYPMPPPPHHHHLLLGAAPPQQIEPILTGNLPPGFDTS
TCRSVYVGNIHVQVTEAFLQEIFQSVGSVDGCKLIRKEKSSYGFVDYYERRSAALAISTL
NGRQIFGQPIRVNWAYASGQREDTTGHFNIFVGDLSPEVTDSALFAFFSGYSSSCSDARV
MWDQKTGRSRGYGFVSFRNQQDAQIVINGLNGQWLGNRQIRCNWATKGANSGEDQQTSDL
KSIADITNNFTENGKDKANIDAPENNTQYRTVYVGNLAHEVTQDVLHRFFHALGAGALEE
VRVQHGKGFGFVKYTNHAEAALAIQMGNSRILGGKPIKCSWGNKPTPSGTTSVPLPPPAA
PSLPAAADLLAYQRAIALNRMASTQALMQAQQTAVGMSVTNQAMYDGTFQNVGAPQLQQQ
QLMYY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccagcagcagcagaaccaggcggctgcgctgatgcagcaggcggccgcgctg
cagtccatgtacccgatgccaccgccgccgcaccaccaccacctcctcctgggcgccgcg
ccgccgcagcagatagaaccaattcttactggaaatctgccacctggttttgatacgagt
acatgccgcagtgtgtatgtcggcaatattcatgttcaagtgacagaggcatttctccag
gagatttttcagagtgttggttcggttgacggatgcaagcttataagaaaagagaagtcc
tcttatggttttgttgactactatgaacgcagatcagctgcccttgcaatttcgacactt
aatgggaggcaaatttttgggcagcccatcagagttaattgggcatatgctagtggtcag
agggaggatacaacaggccatttcaatatatttgttggtgatcttagccctgaggttacg
gattcggcattatttgcattcttctcaggatattcctctagctgctctgatgctcgagtt
atgtgggaccaaaagaccggaagatcaagaggttacggttttgtttcctttaggaatcaa
caggatgcacagattgtcataaatggcttaaatggtcaatggctaggaaatcggcaaatt
cgttgcaactgggcaacaaaaggtgccaacagtggcgaggaccagcaaacatcagatttg
aaaagtatagctgatataactaacaatttcacagaaaatgggaaggacaaagcaaacata
gatgctccagagaataatacacagtacagaactgtttatgttgggaaccttgctcatgag
gttactcaagatgtgctccatcgttttttccacgcactcggtgctggagcattggaggag
gtgcgtgtccagcatggtaaaggctttggatttgtgaagtacaccaaccatgcagaagct
gccttagcaattcagatgggtaatagccgtattttgggcggtaaaccgatcaagtgttcc
tggggtaacaagcccacaccttctggtaccacctctgtgccgctgcctcctcccgctgct
cctagcctccctgctgccgctgatctcctagcatatcaacgcgccattgccttgaacaga
atggcttcgacccaagcattgatgcaggctcagcaaacagctgtggggatgagcgtcacg
aatcaggcaatgtacgatggaacttttcagaacgttggtgccccacaactgcagcagcaa
caactcatgtactactaa
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