Lolium rigidum (rigid ryegrass): 124675075
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Entry
124675075 CDS
T09103
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124675075
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124675075
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124675075
NCBI-ProteinID:
XP_047067099
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Position
7:complement(312566858..312568805)
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AA seq
375 aa
AA seq
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MGASSFSRLCCCWISSSPASRPPPPAAAAAAYLPCPHMEPHPEAHRPCHPRLPYADADRT
LRALAAGAEGFGRHAVGGLHGALYHVTSLQDDGHGTLREACRAKEPLWVVFEVSGTIHLQ
TYLRVSSHKTIDGRGQRVKLAGKGLQLKDCHHVIVCNLEFEGGRGHDVDGIQIKPNSTNI
WIDRCSLADYDDGLIDITRQSTDITVSRCHFARHDKTMLIGADPTHVGDRCIRVTIHHCF
FDGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVEAQIVSQSNIYEGGEKKTVFKYMPE
KAADREETAAGSIRSEGDAFLHGALPCLVDGPGVESVFRPEDYYDKWTMEAASPALKEVI
QLCAGWQPVPRPLDC
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcctcctctttctcccgcctctgctgctgctggatctcctccagccccgcctcc
cgccctccgcctcctgccgccgccgccgcagcctacctcccctgccctcacatggagccg
cacccggaggcccaccgcccctgtcacccgcggctgccgtacgccgacgccgaccgcacc
ctccgcgcgctcgccgccggcgccgagggcttcggccgccacgccgtcggcggcctccac
ggcgccctctaccacgtcacctccctccaagatgacgggcacgggacgctccgggaggcg
tgccgcgccaaggagccgctgtgggtcgtcttcgaggtctccggcaccatccacctccag
acctacctccgggtctcctcccacaagaccatcgacggccgcggccagcgcgtgaagctc
gccggcaagggcctccagctcaaggactgccaccacgtcatcgtctgcaacctcgagttc
gagggcggccgcggccacgacgtcgacggcatccagatcaagcccaactccaccaacatc
tggatcgaccgctgctcactcgccgactacgacgacgggctcatcgacatcacgaggcag
agcaccgacatcaccgtctcaagatgccacttcgcaaggcatgacaagacgatgctgatc
ggcgcagaccccacgcacgtcggcgacagatgcatcagggtcaccatccaccattgcttc
ttcgacggcacacggcagaggcacccgcgcctacggttcggcaaagttcacctctacaac
aattacaccaggaactggggcatttacgctgtctgcgccagcgtcgaagctcagattgtg
tctcagtctaacatatacgaaggaggagagaagaagacggttttcaaatacatgccagaa
aaggctgctgacagggaagaaacagcggctgggtcgatcaggtcggaaggcgacgcgttt
cttcatggggcgctgccgtgcctagtcgacggcccaggcgtcgagagcgtcttcaggccg
gaggattactacgacaagtggaccatggaggcggcatcgccggctctcaaggaggttatt
cagctctgcgctgggtggcaacctgtgcccaggccccttgactgctaa
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