Lolium rigidum (rigid ryegrass): 124675078
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Entry
124675078 CDS
T09103
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124675078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124675078
03036 Chromosome and associated proteins [BR:
lrd03036
]
124675078
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
124675078
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
124675078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Ge1_WD40
RMC1_N
Beta-prop_VPS8
Beta-prop_SCAP
WDR54
Beta-prop_SPT8
CFAP43_N
ATPgrasp_ST
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
124675078
NCBI-ProteinID:
XP_047067102
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All DBs
Position
7:complement(57592309..57594707)
Genome browser
AA seq
475 aa
AA seq
DB search
MDAGSGSMSPERISRRGAPASRPPLQEAGSRPYMPSLCSASRNPAVKCYGDRFIPVRSAM
DMDMAHYLLTEPRKDTKNAATPSPAKEAYRKLLAEKLFNNRTRILAFRNKPPESENILTE
LRADAASIQARPAKKRRYIPQSAERTLDAPDLVDDYYLNLLDWGSSNVLSIALGNTIYLW
NAANGSTSELVTFDEDDGPVTSVSWAPDGRHIAVGLNSSTVQLWDSTSKRLLRTLQGVHE
SRVGSLAWNGNILTSGGMDGKIVNNDVRIRNHAVQTYRGHGQEVCGLKWSGSGQQLASGG
NDNLLHIWDVSMASSVQSAGRTQWLHRLEDHLAAVKALAWCPFQSNLLASGGGGSDRCIK
FWNTHTGACLNSVDTGSQVCALLWNKNDRELLSSHGFTQNQLTLWKYPSMDKMAELTGHT
SRVLFMAQSPDGCTVASAAGDETLRFWNVFGTPDAPKAAVKASHTGMFNSYNHIR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggctcgggctcgatgtcaccggagaggatcagccggcggggtgcgccggcg
tcgcggccgccgctccaggaggcagggtcaaggccctacatgccgtctctgtgctcggcg
tcccgcaaccctgccgtcaagtgctacggggacaggttcatcccggtcagatcggcgatg
gacatggacatggcgcactaccttctgaccgagccaaggaaggacacgaagaacgccgcg
acgccgtcgccggccaaggaggcgtaccgcaaactgctggccgagaagctgttcaacaac
cgcaccagaattctcgccttccggaacaagccgccggagtctgagaacatcctcacagag
ctccgtgctgatgcagcttctatccaggccaggccggcgaagaagcgccgttacatccct
cagtctgccgagaggactctggatgcaccagacctcgttgatgattactacctcaaccta
ctggactggggaagcagcaacgtgctgtccattgcgttgggcaacacgatatacctctgg
aatgctgcaaatgggtctacgtctgagctcgttacctttgatgaagacgatggccctgtc
actagtgttagctgggctcctgatggccgccacattgctgttggcctcaactcttcaact
gtccagctctgggattccacctctaaacgactgctgaggacactgcaaggcgtgcatgag
tcaagagtgggttcactggcatggaatggcaacatactgacctctggtggtatggacggc
aagattgtgaacaatgatgtgaggatcaggaaccatgctgtgcagacataccgcgggcac
ggccaggaggtgtgtggactcaagtggtcaggatcgggacagcagctggccagtggcggc
aacgacaacctcctccacatatgggatgtgtctatggcatcctctgtacaatccgcaggt
cgcacccaatggttacacagacttgaggaccacttggctgccgtgaaggcgctcgcatgg
tgcccattccagagcaacctgctggcatccggtggcggcggaagtgaccggtgcatcaag
ttttggaacacacacacaggcgcatgcctcaactctgtcgacaccgggtcacaagtgtgc
gctctactctggaataagaatgacagggagctgttaagctcacatggattcactcagaat
cagctcaccctatggaagtacccttcaatggataagatggctgaactcaccggccatact
tcccgtgtccttttcatggcccagagccctgatggttgcacagtagcatctgctgcagga
gatgagaccctacgtttttggaatgtatttgggactcctgatgctcctaaggctgcagtc
aaggcttcacacaccgggatgttcaacagttacaaccatatcagataa
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