KEGG   Lolium rigidum (rigid ryegrass): 124675100
Entry
124675100         CDS       T09103                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124675100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrd03019]
    124675100
Messenger RNA biogenesis [BR:lrd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     124675100
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Zn_ribbon_RanBP PBP1_TM
Other DBs
NCBI-GeneID: 124675100
NCBI-ProteinID: XP_047067126
LinkDB
Position
7:58458925..58463945
AA seq 680 aa
MPRKVVSGPDYDDDEYDYEDYEDDYDDYEEVEHVDVKPPVKEKESLKKSSTAVPVLWKCS
MCTFDNHETMMYCEMCGVFRESFVKSAKDAPIKVESVNGISNNSGTSALSNSDSTKTPVK
TLTTNFDGDSERKYASTSRDKVNSAPLASVGSSPGTGKKKQPIKLSEDVPVERTTRLIPD
HFQLKEDQSSRASSSAQTKDYMQTLFSDIGQLSTERNNVNVAQPYLPEEYKPEEWMLADQ
ESGALSQLNLAIVGHVDSGKSTLSGRLLHLLGKISKRDMHKNEKEAKEKGKGSFAYAWAM
DESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDAST
GSFEAGMDGEGGKNVGQTKEHAQLIRSFGVEQLIVAVNKMDVIGYSKERLEFIKAQLGSF
LRACNFRDSAITWIPLSAVENQNLAKPPSDARFTSWYQGLCLLDAIDSLQLPSRDVSKAL
ILPICDVIKSQSTGQLAAFGKLETGAIRNGSKVLVLPCGEVATVKTIERDSRSCSIARAG
DNVAICLQGVDGNRIIPGGILCHPGFPVPVANYLELKIRVLDITLPILLGHQVEFHIHHV
KEAARITKILALLDKTGKPSKAPPRFLKSKQSAVVQVTLDGAICVEEFSKCRALGRAFLR
ASGSTIAVGIVTKIMGQDQY
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgcctcgcaaggttgtctccggtcccgactacgacgacgacgagtacgactatgaggat
tacgaggatgactatgatgattacgaggaggttgagcacgtcgatgttaagcccccggtg
aaggagaaagaatcattgaagaagtcctcaaccgcagtgcctgtgctttggaaatgctcc
atgtgcacatttgataatcatgaaactatgatgtactgtgagatgtgtggggttttccgg
gaatcttttgtcaaatctgccaaggatgctccgataaaagtagaatccgtcaatggaata
tcaaacaattctgggacatctgcactgtcaaactctgattctaccaagacgccagtgaag
actcttactacaaattttgacggtgattctgagagaaagtatgctagcacatcacgtgat
aaagtcaattccgcaccattggcatctgttggtagctcaccaggcactggaaaaaagaag
caaccgattaaactttctgaagatgtgcctgtcgagaggacaactcgactgattcctgat
cattttcagttaaaggaggaccagagtagtagggctagcagttctgctcagactaaggat
tatatgcagacacttttttctgacataggccagctaagtacagaaaggaataatgtaaat
gttgcacaaccttatttacctgaagagtataagccggaggagtggatgctagctgatcag
gagtccggggcgctaagccaactaaatcttgcaatagtgggtcatgttgattctggtaag
tcaacactctctgggagattgctacacctactaggaaagatatcgaaaagagatatgcac
aaaaatgagaaggaggctaaggaaaaaggaaaggggtcatttgcttatgcatgggccatg
gatgagagcagtgaagaaagagaaagaggtgtcacaatgacagtggctgttgcttatttg
gaaaccaagaaataccgtgtagttttgcttgactctcctggccacaaagattttgtgcca
aatatgatatctggtgcaacacaagctgatgcagctattcttgtggttgatgcttcaact
ggttcttttgaagctggcatggatggtgaaggaggaaaaaatgttgggcagacaaaggag
catgctcagcttattagaagctttggtgttgaacagcttattgttgctgtcaacaagatg
gatgttatcgggtactcaaaagaaaggttggagttcatcaaggcacaacttggtagcttt
ctgcgggcatgcaacttcagagattcagctattacctggattcctcttagtgctgtagaa
aatcagaatttggctaaacctccttcagatgctcgttttacctcctggtatcaagggttg
tgtctcctggatgctatagattccctgcagcttccttctcgggatgtttcaaaggctctc
attcttcctatatgtgatgttatcaagtctcagtcgacaggacagctggcagcttttgga
aaattggaaactggagctattcgaaatggttcaaaggtcttagttttaccttgtggggaa
gtggcgacagtgaaaaccatcgaacgggactctaggtcatgcagcatagcgagggctggt
gacaatgtagcgatttgtctacagggtgttgatgggaatcgaataatacctggtgggatt
ctttgccaccctggtttcccggtacctgtagctaactacttggagctaaagattcgtgta
ttggacatcacccttcctattcttcttggtcatcaggtggagtttcacatacatcatgtg
aaggaagctgcaagaataacaaaaatcttggcattgcttgacaagacagggaagccaagt
aaagcaccgccacggtttcttaaatcaaagcagagtgctgttgtgcaggttacgctagat
ggagcgatctgtgttgaggaattctccaaatgccgagctcttggaagggcattcttaagg
gcgtctggaagcacgattgctgtcggtatagtaactaagataatggggcaggatcagtac
tag

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