Lolium rigidum (rigid ryegrass): 124675158
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Entry
124675158 CDS
T09103
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124675158
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrd02000
]
124675158
04147 Exosome [BR:
lrd04147
]
124675158
04090 CD molecules [BR:
lrd04090
]
124675158
Enzymes [BR:
lrd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
124675158
Transporters [BR:
lrd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124675158
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124675158
CD molecules [BR:
lrd04090
]
Proteins
124675158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_24
AAA_30
DUF87
AAA_15
AAA_25
DLIC
Motif
Other DBs
NCBI-GeneID:
124675158
NCBI-ProteinID:
XP_047067185
LinkDB
All DBs
Position
7:134634511..134641588
Genome browser
AA seq
1264 aa
AA seq
DB search
MAAAAPGTARDGETTKKEEVGVDHGKRVSFTGMLRYADGTDLLLMLVGTAAALGNGVSQP
LMTVIFGDLIDAFGGATTGNVLDRVNKAVLSFVYLGIGTAVVSFLQVACWTITGERQATR
IRSLYLKSVLRQDISFFDVEMTTGQIVSRMSGDTVLVQDAIGEKVGKFIQLIATFIGGFV
VAFVKGWLLSLVMLACIPPVVFAAGAVAKLLSTISSKGQESYGDAGNVVEQTIGAIKTVV
SFNGEKHAIATYNKFIHKAYKTTVHEGLANGFGMGSVFLIFFSSYGLAIWYGGKLVLNKG
YTGGDVITILFAIMTGAMSLGNATPCMTAFAEGQSAAHRLFSTIKRKPEIDPDDRSGKQL
EDIRGDVELKDVYFSYPARPDQLIFDGFSLRVSSGTTMAIVGESGSGKSTVISLVERFYD
PQAGEVLIDGMNIKSLQLDSVRGKIGLVSQEPLLFMTSIKDNIMYGKEDATFEEIKRAAE
LANAANFIDKLPNGYDTLVGQRGAQLSGGQKQRIAIARAIIKNPKILLLDEATSALDVES
ERIVQEALNRIMVDRTTLVVAHRLTTVRNADCISVVQQGKIVEQGPHDELVQNSDGAYSQ
LIRLQENHEEEQKVDRQRLDPRSKSASLSFKRSISRGSAGNSSRHSFTLPLGLPGAVELP
EENDTHRENRRELDSDGEVPTKAPMGRLARLNKPEIHIILLGSLAAAVHGVLFPMFGVMI
ASAIKTFYAPPDKLRKDSSFWALMCVVLGILSIISIPAELFLFGIAGGKLIERIRSMSFR
SIVHQEVAWFDDPKNSSGALGARLSVDALNVRRLVGDNLALTVQIISTLITGFVIAFIAD
WKLSLIILCVIPLVGIQGYAQVKFLKGFSQDAKMMYEDASQVATDAISSIRTVASFCSEK
RITTIYDHKCEASMNQGVRTGIVGGIGFGFSFLMLYLTYGLCFYVGAQFVRHGQSDFGGV
FKVFFALVLATMGVSQSSAMAADSAKAKDSAISIFSLLDRKSEIDSSSNEGLKLDDVKGN
IDFQHVSFKYPTRPDIQIFSDFTLHIPAGKTVALVGESGSGKSTVIGLLERFYNPDSGTV
SVDGVEIKSLNVNWLRDQMGLVSQEPVLFNDTIRANIAYGKDGEVTEEELIAAAKASNAH
GFISSLPQGYDTTVGERGIQLSGGQKQRVAIARAILKDPKILLLDEATSALDAESERIVQ
DALDHVMVGRTTVVVAHRLSTIKGADIIAVLKDGAIAEKGRHEELMNIKDGVYASLVELR
SAAS
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcggcccctgggacggcgagggatggcgagacaacaaagaaggaggaggtc
ggcgtggatcacgggaagagggtgtccttcacggggatgctccggtacgccgacggcacg
gacctgctgctcatgctggtcggcacggcggccgcactggggaacggcgtgtctcagccg
ctcatgaccgtcatcttcggcgacctcatcgacgccttcggcggcgccaccaccggcaac
gtcctcgaccgcgtcaacaaggcggttctgagctttgtctacttgggcatcggaacagca
gtagtctcctttctccaggtggcatgttggacaattactggcgaaaggcaggcaacacgc
attcgttctctatacctcaaatctgtcttgagacaggatatatcattctttgacgtagaa
atgacaactgggcagatagtttcaagaatgtctggtgatacggtgctagttcaggatgca
atcggtgagaaggttggcaagtttatacaactgattgctactttcatcggtggtttcgtt
gtagcttttgtcaaagggtggcttctatctcttgtcatgttggcgtgcatacctccagtt
gtatttgcagcaggagcagtggcaaaactgctatctacaatctctagcaaaggtcaagaa
tcatacggtgatgcagggaatgttgttgaacagacaattggagccatcaaaacagttgtc
tctttcaatggagagaagcacgccattgcaacgtacaataagttcatacacaaagcatac
aagactactgtgcacgaaggacttgccaatggctttggcatgggttctgttttcttgata
ttcttctctagctatggtttagccatatggtatggtggaaagttggtacttaacaaagga
tacacaggaggagatgtcatcactatattgtttgctatcatgactggggcaatgtcttta
ggtaatgcaaccccttgtatgacagcctttgcagaaggacaatctgcagcacacagattg
ttctcaacaatcaagaggaaaccagaaattgatcctgatgataggtctggtaagcagcta
gaagatatcaggggtgatgttgagctgaaggatgtgtattttagctacccagcaagacct
gatcaactgatatttgatggattctccttacgtgtgtctagtggcactacaatggctata
gttggagagagtggaagtggtaagtcaactgtgattagtcttgtggagagattttatgat
ccgcaggctggtgaggttttgattgatgggatgaacatcaagagtttacagctcgattcc
gtaagagggaaaattggtcttgttagccaagagcctttgctctttatgacttcaattaaa
gataatataatgtatggcaaagaagacgcaacatttgaagagattaagagagctgctgag
ctcgccaatgcagcaaatttcattgataagttaccaaatggttatgacacactggttggc
caacgtggtgctcagctttcagggggacaaaagcaaaggatcgcaattgcaagagcaatc
attaaaaaccccaaaattcttttgttagatgaggctactagcgcattggatgtggagtcg
gaaaggatagttcaggaggcacttaataggatcatggtggacagaactacgcttgtggtt
gcacaccgtctgactactgtaaggaatgctgattgcatatcagtagttcaacaaggaaag
atagttgaacaaggtccccacgatgaattggtgcaaaattcagatggtgcttactctcaa
cttattcgacttcaagaaaatcatgaagaagagcagaaagtagaccgtcaaaggttggat
ccaaggtctaaaagtgcaagcttgtcattcaagcggtcgattagtagaggttctgcaggg
aatagtagtaggcattctttcaccctccccctcgggctgcctggcgcagttgaattgcct
gaagaaaatgatacacatcgggagaatagaagagagctggatagtgatggtgaggttcca
acgaaagctcctatgggacggctagcacgtcttaacaagccagagatacatattattctg
ttaggatccctagctgcagcagttcatggagtgcttttcccaatgtttggtgtaatgatt
gccagtgccatcaaaactttctatgcgccaccagataaactcagaaaggattctagtttt
tgggctttgatgtgtgttgtgctgggtatcttgtcgataatctcaataccagcagagctt
ttcttgtttggtatagcaggagggaagctcatagagcgcatccgttcaatgtcatttcga
agtattgtgcatcaagaagttgcttggtttgatgatcctaagaattccagtggagcactt
ggtgcaagactgtcagttgatgctttgaatgtacggcgtttagttggagataacttggcc
ttaacagttcagattatctctacacttatcacaggatttgtcattgctttcatagctgac
tggaagctctctttgatcatcctctgtgtcattccattagttggtattcaaggttatgcc
caagtgaagttcctgaagggtttcagtcaagatgctaagatgatgtatgaagacgcaagt
caagtggccactgatgcaattagtagtatcaggactgtagcttcgttttgttctgagaaa
agaattacaacaatatatgatcataaatgtgaagcctcaatgaatcaaggagtcagaaca
ggaatagttggaggcattggatttggtttctcattcttgatgttgtaccttacgtacggt
ctttgcttctatgtgggagcacaattcgttcgccatggccaatcagattttggaggtgtt
ttcaaggttttctttgcactagttttagcgactatgggtgtatctcaatcaagtgcaatg
gccgccgattctgcaaaagcaaaggactcagctatctccatattttctttactagaccga
aagtctgaaatcgactcaagcagcaatgagggtttgaaattagatgatgtcaagggcaac
attgatttccaacatgtcagcttcaagtacccaactcgcccagatattcagatctttagt
gattttactctgcacattcccgccggcaagactgttgcacttgttggagagagtggtagt
ggaaagtcaacagtaatcggactgttggagcgattctacaatcccgattcaggtaccgtt
tcagtggatggagtggaaatcaagagcttaaacgtcaattggttgagggatcagatgggg
ctggtgagccaagagcctgtactcttcaacgacacaatccgcgccaacatagcctatggt
aaggacggtgaagtcaccgaggaggagctcattgcggcagcgaaggcatcaaatgcacat
ggtttcatatctagccttccccaaggatatgacaccaccgttggggagagggggattcag
ctatctggtggccagaagcagcgggtggctattgcacgggccatactgaaagacccaaag
atactactacttgatgaggcgactagcgccttggatgctgagtccgagcggattgtgcag
gatgcattagatcatgtgatggttggcaggaccactgttgttgtggcacaccgcctctca
acgattaaaggtgctgatataattgcagttctcaaggatggtgcaatagcggagaaagga
aggcacgaggagctgatgaatatcaaagatggagtgtatgcttcacttgtagaacttcgt
tcagcggcatcataa
DBGET
integrated database retrieval system
