Lolium rigidum (rigid ryegrass): 124675211
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Entry
124675211 CDS
T09103
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124675211
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124675211
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Helicases
124675211
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Utp25_C
Motif
Other DBs
NCBI-GeneID:
124675211
NCBI-ProteinID:
XP_047067236
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Position
7:complement(79601230..79607571)
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AA seq
881 aa
AA seq
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MAEAPEQPMSDPPTPPQETKQRPKKNKRGRSKKPKRAAAADAAAPSSTGAAMVEDPFLVL
AGGKEGGFLELEEIDGADYGIFGSIVEDVGASARKVGGDQKRKTKRGKRKRGDGAKRLDA
DDDLVPESKEEEGEKAEEKGKRKKKTRKKRKVNDKETDSESKEDATDDNVEEGKKDLTDD
NAEEGKKGEKRGKKKRNRKKRKKVNDEEKDSESKEDVADDIMEDAQDVDENMEQDNNGEL
KLGEDELYAWLELRLHPLLIKAMHRLGFKEPTPIQKACIPAGAHQGKDVIGAAETGSGKT
LAFGLPILQRLLEEREKAERLHVEDEKLTEESSSGGPLRALILTPTRELAKQVCDHLKDA
AKFLGIHVVPIVGGLSMDKQERLLKKKPEIVVGTPGRLWELMSSGNQHLVELHSLSFFVL
DEADRMIERGHFKEVQSIIEMLPLSNSSDEPTVKATSSCETVLNLQVKKRQTFVFSATLA
LSANFRKKLKRGLSTSKASTADDLSSIEALSKQAGMKPNAEIIDLTNASILPAKLEESFI
ECSDDDKDANLYYILSVHGQGRTIIFCTSIAALRHISSLLRILGINVLTNHAQMQQRARM
KAVDRFRESENSILVATDGFARGMDFDNVRTVIHYQLPHSSDVYIHRSGRTARKSLAGCS
IALISPDDKAKFYSLCKSFSKENLQQFPVDQAYMPQVMNRLSLARQIDKISRKNSQENAN
KSWLQRNAESMGLILDASDSEEERVQGHKQRKATSAKLQKLQQDLNELLQHPLQPKTFSR
RYLAGAGISPLLQKQLEDLAKRNVNGNTSNNENKGSQFVIGQDRVEPLQALQDSGQEICV
NMDKQREKRRLAENWRRKKHEEKKSTREQKRNDRRQAKERD
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagcaccggagcagccgatgtcggaccctcccactccgccccaggagacgaag
caaaggcccaagaaaaacaagagaggccgctccaagaaaccgaagcgagccgccgccgcc
gacgctgccgccccctcctccaccggcgccgccatggtcgaggaccccttcctcgtcctt
gccggcggcaaggaaggagggttcctggagctggaggaaatcgacggggccgactacggg
atcttcgggagcatcgtggaggacgtgggagcaagtgcgaggaaggtggggggtgaccaa
aagaggaagacgaagagggggaaacggaagcgaggggatggtgccaagcgcttagatgcc
gatgacgatttggtacctgagagcaaggaggaggagggtgagaaggctgaggagaaggga
aagaggaagaagaagaccaggaagaagaggaaggtgaacgataaggagacggattcagag
agcaaggaggatgctacggatgacaatgtggaggagggtaagaaggatcttaccgatgac
aatgccgaggagggtaagaagggcgagaaaaggggaaagaagaagaggaacaggaagaag
aggaagaaggtgaatgacgaggagaaggattcggagagcaaggaggatgttgccgatgac
atcatggaagatgcgcaagacgtcgatgaaaatatggaacaagataacaatggtgagctg
aaattgggcgaggatgaactttatgcgtggctggagttaagattgcatccccttcttatc
aaggcaatgcacaggcttgggtttaaagaaccaacacccatacaaaaggcttgcattcct
gcaggggctcatcaaggcaaggatgttattggtgcagcagagacaggttctggaaagaca
cttgcctttggtcttcctattttgcagcgccttctcgaagaacgagagaaggctgaaaga
ttacatgtagaagatgaaaaattgactgaggaaagttcttcgggaggcccactccgcgca
cttattttgacacccacaagagaacttgccaaacaggtctgcgatcatctaaaagatgca
gcaaagttcttaggaattcacgttgttcctattgttggtggtttatccatggataagcaa
gaacggcttttaaaaaagaagcctgaaattgtcgttggaactccaggaagattatgggag
ctaatgtcctcaggcaatcagcacctagttgagctgcattcactgtcattcttcgtgttg
gatgaggctgatagaatgatagagcggggtcatttcaaagaagtgcaatctatcattgag
atgcttcctctatctaatagttctgatgagccaactgtaaaagccacgtcaagctgtgaa
actgtgctaaatttgcaagtaaaaaagaggcaaacctttgtcttctccgcgacacttgca
ctctcagctaattttcgcaagaagttaaagcgtggcctttctacttcaaaggcctcaacg
gctgatgatttgagctccatcgaagcactttcgaagcaggctggtatgaaacctaatgca
gaaataattgatttaacaaatgcttcgatcttgcctgcgaaacttgaagaatcattcatc
gagtgtagcgatgatgataaggatgccaacctgtactatatattaagtgttcatggacaa
ggccgcacaataatattttgcacatctattgctgcattgcgtcacatttcttctttattg
cgcatactcggaatcaatgtcttgacaaatcacgctcaaatgcaacaaagggctcgcatg
aaggctgtcgatcgtttccgtgaaagtgagaattccattttggtcgcgactgatggtttt
gcaaggggcatggactttgataatgtccgaactgttatccattatcaactgccacattcc
agtgatgtttatatccacaggagtggaaggacagcacgcaaatcattggcaggttgcagt
attgcgttgatctctcctgatgacaaagccaagttttactctctctgcaagtcattttca
aaggagaacctccagcagtttcctgttgatcaggcatacatgcctcaagtaatgaataga
ctctcccttgctcggcagattgacaagatatcacgtaaaaattcacaggaaaatgctaac
aaatcctggcttcagaggaatgctgaatccatgggacttatattggatgctagtgacagt
gaggaagaacgtgtacagggccacaagcaacgaaaggcaacatctgcaaagctccagaaa
cttcaacaggatttaaacgaactcttgcaacaccccttgcaacctaagactttctcacgg
cgctatttggctggggctggtatttcaccattgctccagaagcaactagaagatttggcc
aaaaggaatgtaaatggtaatactagtaataacgagaataaagggtctcaatttgttatt
ggccaggatcgtgtggaacccttgcaagctcttcaagattctgggcaagagatttgtgtg
aatatggacaagcaaagagagaagagaagacttgctgaaaattggaggcggaagaaacat
gaagagaagaagagtacacgagaacaaaagagaaatgacaggagacaagcaaaagagagg
gactga
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