KEGG   Lolium rigidum (rigid ryegrass): 124675411
Entry
124675411         CDS       T09103                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03020  RNA polymerase
lrd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124675411
  09124 Replication and repair
   03420 Nucleotide excision repair
    124675411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrd03021]
    124675411
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124675411
Transcription machinery [BR:lrd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     124675411
  RNA polymerase III system
   RNA polymerase III
     124675411
  RNA polymerase I system
   RNA polymerase I
     124675411
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124675411
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 124675411
NCBI-ProteinID: XP_047067443
LinkDB
Position
7:108058189..108060652
AA seq 207 aa
MASAEGDTSRLFRVRRTVMQMLRDRGFLVVDADVDLTMGEFVERYGDPVRRDDLVINRVK
KDDPSEQIYVFFPNEAKPGVKIVKSYVEKMKQEQVSNAILVVQQALSAFARNALLGFAAE
KYHVEVFQEGELLINIKNHELVPEHVLLTPEQKKTLLAKYKVKETQLPRIQMGDPIARYY
GMKRGQVVKITRPSETAGKYVTYRYVI
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcgtcggcggagggggacacgagccggctgttccgcgtccggcgcacggtgatgcag
atgctccgggaccgcgggttcctggtggtggatgccgacgtcgacctgaccatgggcgag
ttcgtcgagcgctacggagaccccgtccgccgcgacgacctcgtcatcaaccgcgtcaag
aaggacgaccccagcgagcagatctacgtgttcttcccgaacgaggccaagccgggtgtg
aagatcgtcaagagctacgtcgagaagatgaagcaggagcaggtcagcaacgccatactc
gtcgtgcagcaggcgctcagcgcctttgcccgcaacgcgctgctggggttcgctgcggag
aagtaccacgtcgaggtcttccaggaaggggagcttcttatcaacattaagaaccacgaa
ctggttccggagcacgtgctcctgacaccggaacagaagaagacgctgctcgcgaaatac
aaggtgaaagaaactcagctccctcggattcaaatgggtgatccgatagcaagatactat
ggcatgaagcgtggacaggttgtgaagatcacccggcccagtgagactgctggaaagtat
gtgacatatcgctatgttatctga

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