Lolium rigidum (rigid ryegrass): 124675464
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Entry
124675464 CDS
T09103
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124675464
09123 Folding, sorting and degradation
03018 RNA degradation
124675464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124675464
03041 Spliceosome [BR:
lrd03041
]
124675464
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124675464
mRNA degradation factors
5'-3' decay
Lsm complex
124675464
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124675464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
124675464
NCBI-ProteinID:
XP_047067496
LinkDB
All DBs
Position
7:154910685..154914337
Genome browser
AA seq
97 aa
AA seq
DB search
MSTGGADKSGSGGGAAPVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQ
TEEYVNGQLKNKYGDAFIRGNNVLYISTSKRPPTDGA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccggcggcgcggacaagtccggcagcggcggcggagcagcgccggtgaagacg
ccctcggacttcctcaagtccatcaggggccgccccgtcgtcgtcaagctcaactccggc
gtcgactacagaggtattctggcttgtctggatggttatatgaacattgcgatggagcaa
actgaagagtatgtcaacggtcagctgaagaacaaatacggtgatgccttcatcagaggc
aacaacgttctatacatcagcacctcgaagcggccccccactgatggagcataa
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integrated database retrieval system
