Lolium rigidum (rigid ryegrass): 124675800
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Entry
124675800 CDS
T09103
Name
(RefSeq) DNA mismatch repair protein MSH4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124675800
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124675800
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
TK
AAA_27
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
124675800
NCBI-ProteinID:
XP_047067831
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Position
7:complement(234689605..234700508)
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AA seq
734 aa
AA seq
DB search
MVVIVPPNKTAADGMVGVSELVDKNYPSNKKVTMARGCFDDTKGAVMVKNLSARDPSALG
LDTYCKQYYLCLAAASATIKWIESEKGVIITNHSLSVTFNGSFDHMNIDSTSVQTLEIID
PLHTELWGTSNKKKSLFQMLKTTKTTGGSRLLRANLLQPLKDIQTINTRLDCLDELVSNE
ELFFGLTQGLRKFPKESDKVLCHFCFKPKKVTDEVLKPANGRKSQMLISDIIVLKTALDA
IPFLSKVLKGAKSFLLQNIYQTVCENPKYASMKKRIGDVIDEDVVHSRAPFVACTQQCFA
IKAGIDGLLDVARRSFCDTSEAIHNLATKYREEFNMPNLKIPYNNRLGFYFIIPQKDITE
KLPNKFIQVVRHGKNVHCSSFELASLNVRNKSAAAECFLRTELCLEGLINEIREDIAILT
MLAEVLCLLDMIVNSFAYTISTKPVDRYTRPEFTDDGPMAINAGRHPILESLHTDFVPNN
IFLSEASNMVLVMGPNMSGKSTYLQQICLIVILAQIGCYVPAQFASLRVVDRIFTRIGTG
DNVENNSSTFMTEMKETAFIMQNVSSKSLVVVDELGRATSSTDGLAIAWSCCEHLLSLKA
YTVFATHMEGLSELATMYPNVKILHFEVDLRNNRLDFKFQLKDGVRRVPHYGLLLARVAG
LPASVIDTATNITSRITEQEMVRMDANCEQYRSLEMAYQAVQRLICLKYSNQGDDYIREA
LQDLKESYAAGKLT
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggttgtaattgtgccccctaataaaacagctgcagatggtatggttggagtttcagag
ctggttgataaaaattacccatcaaacaaaaaggtcaccatggcacgtggttgctttgat
gatacaaagggggctgttatggtgaaaaacctttcagccagggacccatctgcactaggt
ttggatacttactgcaagcagtactatctttgtcttgctgcggcctctgcaacaataaag
tggatagaatcagaaaaaggtgtaattattaccaaccattccttatcagttacattcaac
ggctcgtttgaccatatgaacattgattcaactagtgttcaaaccttagaaattattgac
cctctccatactgaactgtggggtactagcaacaaaaagaagagtctctttcagatgctg
aagactacaaagactacaggagggtctagactactgagagccaacttactacaacctcta
aaagatattcaaactatcaatactcggctcgattgcttggatgagctagtgagcaacgag
gaactgttctttggcttaacacaaggtcttcgtaaatttccaaaagaatcagataaggtt
ctctgccacttctgcttcaagcctaaaaaggtcactgatgaggtactgaaacctgccaat
ggtagaaagagccaaatgttgatatctgacattattgtcctaaaaactgctctggatgca
ataccattcctctccaaggttctgaagggggctaaaagttttcttcttcagaacatttat
cagacagtatgtgaaaatccaaagtatgcaagcatgaaaaagagaatcggggatgtgatt
gatgaagatgttgttcattcaagggctccttttgtagcttgcactcagcagtgcttcgct
attaaggcaggaattgatgggctgcttgatgttgctcgccgatcattctgtgataccagc
gaagccatacataacctcgccaccaagtacagggaggagtttaatatgccaaatctgaag
ataccatataacaacagactggggttttactttattattccccagaaggacattactgaa
aagcttccaaataaatttattcaggttgttaggcatgggaagaatgtccattgctcaagc
tttgagcttgcttcgctaaatgttaggaacaaatcggctgctgctgagtgcttcttgcgc
acggaactttgtttggaaggacttattaacgagatcagagaagatattgctatcttaaca
atgctcgctgaagtattatgtcttttggacatgattgtaaattcttttgcctatacaata
tctacaaagcctgttgatcgttacacgagaccagagtttacagatgatggtccaatggca
atcaatgctggacggcatcctatcctcgagagcttacatactgattttgttcctaacaat
atctttctttccgaagcatcaaatatggttcttgtcatggggccaaacatgagtgggaaa
agcacatatcttcaacagatttgtcttatagtcattcttgcgcaaattggctgttacgtt
ccagctcagtttgcatcattgagagtcgtagatcgtatattcacacgtataggcactgga
gacaatgttgaaaacaactcgagcacgtttatgacagaaatgaaagagacagctttcatc
atgcaaaatgtttcttcaaagagcttggttgtagtagatgaacttggaagagctacttct
tccaccgatgggttggcaattgcatggagctgctgtgaacaccttctatccctcaaagcc
tacaccgtgtttgcgacacacatggagggcttgtcagagcttgcgacgatgtatccaaat
gtgaaaatcctccatttcgaagtcgacttgagaaataaccgcttggatttcaagttccag
ctgaaggatggtgtccggcgggtaccgcactatggacttctgctagccagagtggctggc
ctccctgcttcggtgatcgacaccgcgaccaacattacttcacgtatcacagagcaggaa
atggttaggatggatgcgaactgtgagcaataccggtctctcgagatggcttaccaggct
gtgcaacggctcatctgcttgaagtactcgaaccaaggcgatgactacatccgtgaagca
ttacaggacctcaaggagagctatgccgcaggtaagttgacatga
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