Lolium rigidum (rigid ryegrass): 124675994
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Entry
124675994 CDS
T09103
Name
(RefSeq) soluble starch synthase 3a, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00500
Starch and sucrose metabolism
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
124675994
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lrd01003
]
124675994
Enzymes [BR:
lrd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
124675994
Glycosyltransferases [BR:
lrd01003
]
Polysaccharide
Storage polysaccharide
124675994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
FAINT
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
124675994
NCBI-ProteinID:
XP_047068037
LinkDB
All DBs
Position
7:complement(6107085..6115423)
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AA seq
1225 aa
AA seq
DB search
MEMALRAQTPLCSRSRPVLVLRPATAAAATGVAQSIVKCSRFSRARLVRCMVASSDYPKR
SPTRSSAPKSKGTASRGYAPGPAAESSTEKIEQSSADEGDLGTSNGTLTSEATEQESTPV
EESSVDLSENVSTSAELEGVNEAEAEEEPDQKQSPALPSTSMDAESIDRELEEYRGKISA
LVGSSLGSTQGHNQSVIGVHEQDEQVISSSEQDTSVDDVPEQSQSVVDVIEEDPTKQTTI
VSEKDISEEEVEQIASKHLEPREFLLSEDEAGASKDDNEEPLVAGDELRIAEDEEQHEPE
MQEQVQEDVDPQAIKRRLEKLAYETYSIGNNCFVFPEVVKADSVIELYLNRSISALASQP
DILIKGAFNGWRWNPFTEKLHKSELTGDWWCCKLYIPKQAYRLDFVFFNGDTVYENNNYN
DFVLQIKSDIDEHSFEDFLLEEKQMELERLAAEEAERERQAEEERRKEEERAKVEADREQ
AKAEVEMMRNRLEHVLGSASRYADNLWYIEPNTYKGGDRVRLYYNRTSRPLMHTNEIWLH
GGYNNWIDGPSIAERLVKSEEKDGDWWYATVTLPESALVLDWVFADGPPGNARKYDNNEK
QDFHAAVAKSISDNLFWVEEENRIFERLQQDRKEREDAGRRRAEITARMKAQTKEKTMRE
FLLSQKHIVYTEPLEVRAGTTVDVLYNPSNTVLNGSPEVWFRCSFNRWTHPSGPLPPQKM
VNAENGSHLQATVRVPMDAYMMDFVFSESEEGGTYDNRNGMDYHIPVSDSMGKEPPMHIV
HIAVEMAPIAKVGGLGDVVTSLSRAIQDLGHKVEVIIPKYDCLNLSNVKDLHCRQSFTWS
GTEIKVWFGKVEGISVYFLEPQNGMFWVGCVYGKNDESRFGFFCHSALEFLFQSGSSPDI
IHCHDWSSAPVAWLYKQQYVHNGLPNGRVVFTIHNLEFGANQIGKAMAHCDKATTVSDTY
SKEVSGHGSIAPHYFKFHGIRNGIDSDIWDPYNDNFIPVYYTSENVVEGKSSAKRALQGK
LGLHQTDAPLVGIISRLTAQKGIHLIKHAIYRTLERNGQVVLLGSAPDPRIQSDFINLAK
KLHGEFDGRVKLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPIVRKTG
GLYDTVFDVDDDKDRAHEQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFNSLCKR
VMEQDWSWNRPALDYMELYHSARKN
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggagatggctctccgggcgcagaccccgctctgctcccggagccgcccggtgctcgtc
ctgcgccccgccaccgccgccgccgctaccggcgtcgcgcagtccatcgtaaagtgcagc
agattttcaagagccaggcttgttcgatgcatggtagccagttcagattaccctaagagg
agtccaacgagatcatcagctcccaagtccaaaggcactgcctctagaggatatgctcca
ggacctgccgctgaatccagcacggagaagattgagcagagtagcgccgatgaaggtgat
cttggcacaagcaatgggacgctcactagtgaagcaacagaacaggaaagtactccagtt
gaagaatctagtgtggacttgtcagaaaatgtttctactagtgcggagctggagggagtg
aatgaggctgaggctgaagaagagcctgaccagaagcagtctccagcattgccttccacc
tccatggatgccgagtcaattgacagagaacttgaggagtaccgtggcaaaataagtgcg
ctggtgggttcatcgcttggtagcactcaaggacacaaccaatccgttattggtgttcat
gaacaagacgaacaggtaattagttccagtgagcaagacacatcagtcgacgatgttcct
gaacaaagccagtcagttgttgatgtcattgaagaagatccaacgaagcaaactaccata
gttagtgaaaaggatatttctgaagaagaagttgagcagatagccagcaagcatctcgag
cctagagaatttcttttatcagaagatgaagccggggctagtaaagatgacaatgaagag
cctttggttgctggtgatgaactgaggatagcagaagatgaggaacagcatgaaccagag
atgcaagaacaggtacaggaggatgttgatcctcaagcaataaagcggaggcttgaaaag
cttgcatatgaaacgtattcgatcgggaacaactgttttgtttttcctgaagtggtgaaa
gctgattcagttattgagctttacttaaatcgtagcatctctgccttagcaagccagcct
gatattcttatcaaaggggcattcaatggttggagatggaacccttttactgaaaaatta
cataaaagtgaactaacaggggattggtggtgttgtaagctctacatacccaagcaggca
tacagattagactttgtgttctttaatggtgacaccgtatatgaaaacaacaattataat
gatttcgtcctgcaaataaaaagtgacattgatgaacactcatttgaggacttcctgctt
gaagaaaagcaaatggaacttgaaaggcttgccgcagaagaagctgaaagggaaagacaa
gctgaggaagagcgccggaaggaggaagaaagggccaaagtggaggctgacagggaacaa
gcaaaggctgaggttgagatgatgaggaatagattggagcatgtgttgggttcagccagc
agatacgccgataatctatggtatatagagcctaacacatacaaaggaggggatagggtc
agattatactataatcgaacctcgagaccactaatgcatacaaatgagatatggttgcat
gggggttacaacaactggattgatgggccctctattgctgaaagactagtcaaatctgaa
gaaaaggatggtgattggtggtatgcaactgttactttacctgaaagtgcattggtgttg
gactgggtttttgctgatggacctcctgggaatgcaaggaagtatgataacaatgaaaaa
caagatttccatgctgccgttgcaaagagcatatctgataatttattttgggttgaagaa
gaaaataggatatttgaaaggcttcagcaagacaggaaagaaagggaggatgctggtcgg
agaagggctgagataactgcaaggatgaaagctcagacaaaggagaagactatgagagag
tttcttctctcacagaaacacattgtctatactgagccacttgaagtacgtgcaggaacc
accgtggatgttctgtacaatccttctaacacagtgctgaatggaagtccagaagtttgg
ttcagatgttcatttaaccgttggactcatccaagtggtcctttgccaccacagaagatg
gtgaatgcagaaaatggctcacacttacaagccacagttagggttcctatggatgcatac
atgatggactttgttttctctgagtcggaagaaggtggaacatatgacaaccgaaatggg
atggactaccatattcctgtctctgattccatggggaaggaaccacctatgcatattgtg
cacattgcagtagaaatggctcctattgcaaaggttgggggtcttggcgatgttgttact
agtctttcacgagctattcaagatttaggccacaaggttgaggtcattattccaaagtat
gactgtttaaacctaagcaatgtgaaggatttacattgccgtcaaagttttacttggagt
ggaacagagataaaagtatggtttggaaaggttgaaggcatctctgtttatttcttggaa
ccacagaatgggatgttttgggttggatgtgtctatggaaagaacgatgaaagcagattt
ggcttcttctgtcactctgctctggagtttcttttccagagtggttcttctccagatatc
atacattgtcatgattggtcaagtgctccagttgcttggctgtacaagcaacagtatgtt
cataacgggttgccaaatggccgggttgtatttactatccacaatcttgaatttggcgca
aatcaaattggtaaagcaatggcacactgtgataaagctacaactgtttcagacacatat
tcaaaggaagtgtctgggcatggttctattgctcctcactattttaaattccatggcatc
cgtaatggaattgattctgatatttgggatccatataatgataacttcatcccggtttat
tatacttctgagaatgttgttgaaggtaagagttctgcaaaaagggcattgcaggggaag
cttggattacatcaaactgacgcccctctggttggaatcattagtcggcttacagcccag
aagggaattcaccttatcaaacatgcaatttatcgaactcttgagcgcaatggacaggtg
gttttactaggctcagctccagatcctcgcatacaaagtgacttcatcaacttagctaaa
aaacttcatggtgaatttgatggccgcgtgaagctttgtttaacttatgacgagccattg
tcacatttgatatatgctggcgccgacttcattcttgtcccttccattttcgaaccttgc
ggtttaacacagcttactgctatgcgatatggatccatcccaattgttcggaaaactgga
ggcctgtatgacactgtttttgacgtcgacgatgataaggaccgggcccacgagcaaggc
cttgagccaaacggattcagttttgaaggagctgacagcaatggtgtagattacgctctg
gacagggcgatcaccacgtggtacgacgctcgcgattggttcaactccctctgcaagagg
gtaatggagcaagattggtcctggaaccggcctgctctggactatatggaactgtaccat
tccgcccgcaagaactga
DBGET
integrated database retrieval system
