Lolium rigidum (rigid ryegrass): 124676344
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Entry
124676344 CDS
T09103
Name
(RefSeq) protein argonaute 1A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124676344
03036 Chromosome and associated proteins [BR:
lrd03036
]
124676344
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124676344
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124676344
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124676344
microRNA pathway
RISC loading complex
124676344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
124676344
NCBI-ProteinID:
XP_047068378
LinkDB
All DBs
Position
7:33712314..33729884
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AA seq
736 aa
AA seq
DB search
MKSLYELHDLMPDHVPPAILQALHIVLRELPTEEWYNRYAGSIYSPCIRGHQQLGDFLES
RRGFHQSIRPTQSGLMLNIDQSSTVFIKPLLVMDFVKMLLNRDISDTQLTGTDLLKIVKA
LEGVKVHVLCNMHKEYCVSGVTSQSAEELIFPVDSHGTREPRETVLQYFQKRYGVSIQYK
SLNCLQVGTPQRPKFLPLEVCKIAKGQRYSKQLNRGKQMEDFLKVAKQPPHEREKGILRA
LHFTHRNQCAVKLGIKIEDELVSLLAHILSPPLLKFNDYGMTRSFLPHYGIWNMMGKKMV
KGGRVNSWACINFSLHVRQNEATNFCYELAIMCLASGMGFNLSPVLSVETAKPEHAQLAL
TSLHSNVMAKLGPGRNLDLLLVILPDKNGSLYGDLKRICETDIGLVSQCCLSKHVLRKNK
QYLANVALKINVKMGGRNTVLNDALEKKLPHVGDTPTIFFGATVTHPPPGKCSSPSIASV
VASQDWPEVTRYAGLVSSQPGHHEWINNLVELQYDSEKGVVTGGMIREHLISFYRVTGQK
PQRIIFYRNGVSKGQYSQVLKNELCAIKLACKSLEKDYNPTITYVVVQKRHRTRLFPADY
RDKPSDSTGNLWPGSVVDSVICHPDEFDFYLCSHSCSRDKGRGTIRPMYYHVLWDENKFL
AGDFQTLTYYLCYMYAGCTHSISIVPPLRYARRLASRARCYTEPRSSLESGSTAISAEPV
GLLPIKDSLKFGMFFC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttatatgagctccatgatctgatgccagaccatgtacccccggcaatcctg
caagcactacacattgttctacgtgaattgcccactgaagaatggtataaccggtatgct
gggtcaatttattcaccttgcataagggggcatcagcaacttggtgatttcttggaaagt
cgccgtggttttcaccaaagcatacgacccactcagagtggtcttatgctaaatattgat
caatcctctacagtattcatcaagcccctactggtgatggattttgttaagatgctgctg
aacagggatatatctgacacacaattaactggtacagatctcttgaagattgtgaaggca
ctagaaggtgtaaaggttcatgtactgtgcaatatgcacaaagaatactgtgtatccggt
gttacctcacaatcagcagaagagttgattttcccggttgatagtcatggtaccagggag
cctagggagacagtattgcaatacttccagaagagatatggtgttagtattcagtacaaa
tctttgaactgtttgcaagtgggcaccccgcagaggccgaaatttcttccgttggaggtc
tgtaagatcgccaaggggcagcgttactcgaaacagcttaaccggggaaaacagatggag
gattttcttaaagtagctaagcagcccccacatgagcgtgagaagggcattttacgggct
ttgcatttcacacataggaatcaatgtgctgtgaaattgggaatcaaaattgaggatgaa
cttgtctcactgctagctcatattttatctcctcctttgcttaagttcaacgactatggc
atgacaagatcattcttgccacactatggtatatggaatatgatgggcaagaaaatggtc
aaaggtgggagagtgaatagctgggcatgtatcaacttttccttgcatgtgcgacagaac
gaagctactaatttctgttatgagcttgctattatgtgcctagcatctgggatgggattc
aatctgagtcctgtgctttctgtagagactgctaaacctgaacatgcgcaactggcactg
acatcacttcatagcaatgtcatggccaaacttggaccaggcagaaatcttgaccttctg
cttgtgatattgcctgacaagaatggctccctttatggtgatctcaaaagaatatgtgag
acagatattggactggtttctcagtgttgtctatcaaaacatgtcttgaggaagaataag
cagtatcttgcaaacgttgcccttaaaattaatgttaagatgggaggaagaaatactgta
ctgaatgacgctctagaaaagaaacttccccatgttggggacacaccgactatttttttc
ggtgctactgttacccatcctcctcctggaaaatgttcttctccttccattgcatctgtt
gttgcttctcaagactggcctgaagttactaggtatgctggattagttagttcgcaaccc
ggtcatcatgagtggataaataatctggttgaactccagtatgatagtgaaaaaggggtc
gttactggtgggatgatccgcgagcatctcatttctttctatcgggttactggacagaaa
ccgcagagaattattttttacagaaatggggtgagcaaaggacagtactctcaggttctg
aagaacgaactttgtgccattaaactggcatgtaaatcattggagaaagattataaccca
acaattacatatgttgtggtccagaagcgtcatcgtacacggctgtttcccgctgattac
cgtgacaagccctctgattcaactgggaacttatggcctggtagtgtcgtggattcagta
atatgccatccagatgaatttgatttttacttgtgtagccatagctgcagcagggataag
ggtcgtggaacaattcggcccatgtattaccatgttttgtgggatgagaataaatttcta
gcaggcgatttccaaacattgacatactacttgtgctacatgtatgctgggtgtacccat
tccatttcaatagttccccctttgcgttatgcccgtcgtttggcttctcgagctcgctgt
tatactgaaccacggtcgtctttggagagcggatccactgcgatcagtgccgagccggtg
ggccttcttccaataaaggatagtttaaaatttggcatgtttttctgttaa
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