Lolium rigidum (rigid ryegrass): 124676422
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Entry
124676422 CDS
T09103
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124676422
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124676422
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124676422
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124676422
03041 Spliceosome [BR:
lrd03041
]
124676422
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124676422
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
124676422
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124676422
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124676422
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124676422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
124676422
NCBI-ProteinID:
XP_047068470
LinkDB
All DBs
Position
1:complement(135301347..135302843)
Genome browser
AA seq
305 aa
AA seq
DB search
MDGNALEELIRRLLDGKKNKGPGKKVQLSEAEIRHLCVAAKEIFLSQPNLLELEAPINVC
GDIHGQFSDLLRLFDYGGLPPAANYLFLGDYVDRGKQSIETICLLLAYKIKFPDNFFLLR
GNHECASINRIYGFYDECKRRFSVRLWKLFTDCFNCLPVAALVDDKILCMHGGLSPDLDS
LDRIREIQRPVDVPDQGLLCDLLWSDPDRDSSGWGENDRGVSFTFGADKVAEFLNKHDLD
LICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFNNAGALMNVDASLLCSFQILKPLRSK
TQQTE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaacgctctggaggagctgatacggcggctcctggacgggaagaagaacaag
gggccggggaagaaggtgcagctgagcgaggccgagatccggcacctctgcgtcgccgcc
aaggagatcttcctctcccagcccaacctcctggagctcgaggctcccatcaacgtgtgc
ggcgacatccacggtcagttctcggacctgctccggctgttcgactacggcgggctaccg
ccggccgccaactacctgttcctgggcgactacgtggaccgcgggaagcagagcatcgag
accatctgcctgctgctggcctacaagatcaagttcccggacaacttcttcctgctgcgg
ggcaaccacgagtgcgcctccatcaaccgcatctacggcttctacgacgagtgcaagcgc
cgcttcagcgtccgcctctggaagctcttcaccgactgcttcaactgcctccccgtcgcc
gccctcgtcgacgacaagatcctctgcatgcacggcggcctctccccggacctcgacagc
ctcgaccggattagggagatccagcggcccgtcgacgtgcccgaccagggcctcctctgc
gacctcctctggtccgaccccgaccgcgacagctccggatggggcgagaacgaccgcggc
gtatccttcaccttcggcgccgacaaggtcgctgagttcttgaacaagcacgaccttgac
ctcatctgccgcgcacatcaggtcgtggaggacggttacgagttcttcgcggaccggcag
ctggtcaccatattctccgcgcccaactactgcggcgagttcaacaacgccggcgcgctc
atgaacgtcgacgccagcctcctctgctccttccaaatcctcaagcccttgagaagcaaa
acgcagcagacggagtga
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integrated database retrieval system
