Lolium rigidum (rigid ryegrass): 124676763
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Entry
124676763 CDS
T09103
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124676763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124676763
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124676763
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124676763
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124676763
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124676763
Messenger RNA biogenesis [BR:
lrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124676763
Chaperones and folding catalysts [BR:
lrd03110
]
Heat shock proteins
HSP60 / Chaperonin
124676763
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124676763
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124676763
Exosomal proteins of other body fluids (saliva and urine)
124676763
Exosomal proteins of breast cancer cells
124676763
Exosomal proteins of colorectal cancer cells
124676763
Exosomal proteins of bladder cancer cells
124676763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
124676763
NCBI-ProteinID:
XP_047068748
LinkDB
All DBs
Position
7:complement(327432847..327437184)
Genome browser
AA seq
579 aa
AA seq
DB search
MASANAISSASLLRSFSSQQGRLRRSKNGRSARLVVRAEAKEIAFDQKSRAALQAGVEKL
ANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELANPMENAGASLIREVASKTNDS
AGDGTTTACVLAREIIKLGILSVTSGANPVSLKKGIDKTVQGLILELENRARPVKGSGDI
RAVASISAGNDELIGAMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF
VTNLEKSIVEFENARVLITDQKITSIKEIIPLLEQTTQLRCPLFIIAEDITGEALATLVV
NKLRGIINVAAIKAPSFGERRKAVLQDIAIVTGAEYLAKDLGLLVENATVEQLGAARKIT
IHRTTTTLIADAASKDEIQARVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGAA
TETELEDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTCVPAIKETIEDHDERLGADI
IQKALLAPAALIANNAGVEGEVVIEKIKESEWEFGYNAMTDKYENLIESGVLDPAKVTRC
ALQNAASVSGMVLTTQAIIVEKPKPKAKVAEPSDGALAV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgaacgccatctcgagcgcctccctcctccgctccttctcctcccagcag
gggaggttgaggaggtccaagaacggccgttccgcgcggctagtggtgcgcgcggaagcc
aaggagatcgccttcgaccagaaatcccgggccgcgctccaggccggcgtcgagaagctc
gccaacgccgttggcgtcaccctcggcccgcgagggaggaacgtagtgctcgatgagtac
ggcagtcctaaggtggtgaacgatggtgttaccattgcccgggctatcgagctagctaat
ccaatggaaaatgccggtgcatcactgattcgtgaggttgctagcaagaccaatgattct
gctggtgatgggactacaactgcttgcgtccttgctcgggaaatcatcaagctgggaatt
ttgagtgtaacttctggggcaaaccctgtatcacttaagaaaggaatagacaaaactgtc
cagggtctgattctcgagcttgaaaacagagctagaccagtcaagggcagtggtgatatc
agagctgttgcctctatctctgctggcaatgatgaacttattggagccatgattgctgat
gctattgacaaagtgggcccagatggtgtcctttctatcgaatcatcttcgtcttttgag
actactgttgatgttgaagaaggaatggagattgaccgaggctacatttcccctcaattt
gtgacaaaccttgagaaatcaattgtggagtttgagaatgctagagttcttataactgat
caaaagatcacaagcataaaggaaattatcccacttctggagcagacgacacagttgaga
tgtccgctgtttatcatagctgaggacattactggtgaagctttggcaactctggttgtt
aacaagctccgaggtattattaatgttgctgcgatcaaagccccaagtttcggtgagcgg
cgaaaggctgtccttcaggacattgccattgtgacaggcgctgaatacctggcgaaggat
cttggcctgttggttgagaatgcaacagtggagcaacttggggcagcaaggaaaataaca
attcatcggactacaacaaccctcatagcagatgcagctagcaaagatgagatccaggca
agggttgcacagctaaagaaggagctctctgaaactgattccatatatgattctgagaaa
ttggctgagagaatcgcaaagctctctggtggcgtggctgtcatcaaggttggagctgca
accgagacagagctcgaggaccgtcagctgcgaatcgaggatgcaaagaatgccactttt
gcagctatcgaagagggcattgttcctggtggtggcgcagcgtatgtgcacctgtctact
tgtgtccctgcgatcaaagaaacgatcgaagaccatgatgagcgccttggtgctgacatc
attcagaaggcactgttagcacctgcggcattgatcgctaataatgccggagtggaaggg
gaagttgtgatcgagaagatcaaggagagcgagtgggaatttggctacaacgcgatgacc
gacaagtacgagaacctgatcgagtccggtgtcctggaccccgccaaggtgacgagatgc
gctctccagaacgccgcctcggtgtctggcatggtcctcaccacacaagcgatcatcgtc
gagaagccgaagcccaaggctaaggtcgctgagccatcggacggagccctcgctgtctaa
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