Lolium rigidum (rigid ryegrass): 124676845
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Entry
124676845 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124676845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124676845
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124676845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
124676845
NCBI-ProteinID:
XP_047068825
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All DBs
Position
7:complement(344365869..344368944)
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AA seq
240 aa
AA seq
DB search
MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGDVVDIYIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDRLDGRLVDGREMMVQFAKYGPNAERIQKGRIMETLPRSRGRSRSR
SPRRGYRDDHRGRDYSRRRSRSPSRERYGRDRHTERDYHRRSRSRSYSPDDYRRRGRDRS
PSRSRSRSYSPEDDNRRGRASVSPARRSTSRSPRRTPSSREGSPVKRNEDRSPCSRSPST
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcttcggacgctccggcccgccgccgatccgcgacacctactccctcctcgtc
ctcaacatcaccttccgtacgacggctgacgacctcttcccgctattcgacaagtacggc
gacgtggtcgacatctacatccccagggaccgcaggactggcgactcgcgagggtttgcc
ttcgtgaggtacaagtacgaggacgaggcgcagaaggcagtcgatcgattggacgggagg
ttggtagacgggagggagatgatggtgcagtttgccaagtacggcccgaacgctgagcgg
attcaaaaagggagaatcatggaaacgctcccaaggtcaaggggtcggtccagaagccgc
agtccaagacgggggtaccgggatgatcatcggggcagagattattctagaaggcgaagt
cggagtccgagtagagagcgatatggacgtgacaggcacacagagagggattatcatcgt
cgtagcaggagtcgcagctacagtcctgatgattacaggaggcgtggcagggacagaagc
cctagtcgtagcaggagccgcagctacagtcctgaggatgacaacaggcgtggcagagcc
agtgtgtcgcctgcgcgtagaagcactagtcgttcacctcgcaggacgccatcttctcgt
gagggatctcctgttaagcgcaatgaggaccgatctccatgctctcgtagcccttcaaca
taa
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