Lolium rigidum (rigid ryegrass): 124677443
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Entry
124677443 CDS
T09103
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124677443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124677443
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124677443
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124677443
NCBI-ProteinID:
XP_047069386
LinkDB
All DBs
Position
7:complement(341994145..341998158)
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AA seq
263 aa
AA seq
DB search
MSAAAAAAGTYTPAAEAGGKRREKREELRRHLAEDADWPRADGRSIHDCRPAFMQTGPTT
AASGSAYAEFGKTKVIVSVFGPRESKKAMLYSDTGRLNCSVSYTTFATGIRGQGLENKEY
SGMLHKALEGAVMLHTFPKTTVDVFALVLESGGSDLPVIISCASLALADAGIMMYDLVTS
VSVSCLGKNVIIDPTSDEEAWQDGGLMVSYMPTRREITQLTLTGEWSDGKITNAVELCMD
ACSKLCEILRERLKDSAVLEENE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcggcagcggctgcgggcacgtacaccccggcggcggaggctgggggaaag
cggcgggagaagagggaggagctgcggcgccacctcgccgaggacgccgactggccccgc
gccgacggccgctccatccacgactgccgccccgcatttatgcaaacaggaccaactact
gctgcatctgggtctgcgtacgcagaatttgggaagactaaggtcattgtatcagtgttt
ggcccaagggagagcaagaaagcaatgctgtacagtgacactggtaggctcaattgcagt
gtgagctatacaacatttgccactggtatacgtggacagggattggaaaacaaagagtac
tcaggaatgcttcataaagcccttgaaggcgcagtcatgctacatacttttccaaagaca
actgttgatgtttttgccttggttcttgagtctggtggcagtgatcttcccgtcattata
tcttgcgctagtcttgcattggcagatgctgggatcatgatgtatgaccttgttacatca
gtatctgtgtcctgtttagggaagaatgttatcatcgatccaacctcagacgaggaggca
tggcaagatggaggccttatggtgtcttacatgccaacccggagggagatcacacagctt
accctcaccggggagtggtctgatggcaaaatcaccaatgcagtagagctctgtatggac
gcttgcagcaagctctgcgagatactgcgggagcgcttgaaagatagtgctgtcttggag
gagaatgaatga
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