Lolium rigidum (rigid ryegrass): 124677505
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Entry
124677505 CDS
T09103
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124677505
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124677505
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124677505
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124677505
Peptidases and inhibitors [BR:
lrd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124677505
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124677505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
Malt_amylase_C
pP_pnuc_2
SASP
Motif
Other DBs
NCBI-GeneID:
124677505
NCBI-ProteinID:
XP_047069444
LinkDB
All DBs
Position
7:complement(193906506..193918086)
Genome browser
AA seq
1119 aa
AA seq
DB search
MTISSPPQAPPEQQPQPLEEEVLVPHQDLPNGAQPMEVVPAEPAATVENQQIEDPPISRF
TWTIENLSRVNAKKLYSETFVVGSFKWRVLIFPRGNNVEFLSMYLDVADSSVLPYGWTRY
AQFSLSVVNQIHSKFTIRKETQHQFSARESDWGFTSFMPLSELYNPSRGYLVNDTCIIEA
EVAVCKVVDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDM
PAGSIPLALQSLFYKLQYNDSSVSTKELTKSFGWDMHDSFMQHDVQELNRVLSEKLEDKM
KGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCQDVYASFDKYVEVE
RLEGDNKYHAEQHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQL
DLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVT
KEDGKRALEEQYGGEEELPQTNPGLNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD
IAEHLRIRLEKDREEKERRKKEKAEAHLYTIIKVARDDDLTAQIGKDIYFDLVDHDKVQS
FRIQKQMPFTQFKEEVAKEFGIPTQFQRFWLWAKRQNHTYRPNRPLTPQEEALTVGQLKE
AANKAHNAELKLFLEVELGLDLKPLALPDKTREDILLFFKLYDPEKEQLRYVGRLFVKVS
GRPQDILPKLRKMAGFLQDDDVELYEEIKFEPNVMCEYIDNRIIFRSCQLEDGDIVCFQK
SPKPDTADQYRYPDVPSFLLYMRNRQLVHFRSLEKPKEDDFCLEMSKIFTYDEVVEKVAE
KIGVDDPSKIRLTSHNCYSQQPKPQPIKYRGVDRLLDMLIHYNQTSDILYYEVLDIPLPE
LQALKTLKVTYHHATKDEVSVHSIRLPKNSTVGDVLNDIKSKVELSHPDAELRLLEVFYH
KIYKIFAPSEKIENINDQYWTLRAEEVPEEEKNLGPFDRLIHVYHFTKDTQNQTQVQNFG
EPFFMVIREDETLSSIKERLQKKLKVSDEDFSKWKFAYISLGRPDYFEDSDTVATRFQRN
MYGAWEQYLGLEHPDTAPRKAHTANQNRHSFERPVKIYN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgacgatctcctccccgccccaggctcctcccgagcagcagccgcagccgctggaagag
gaggtgctcgtgccgcaccaggacctgcccaacggggcgcagccaatggaagtggtgcct
gctgagccggctgctactgtggagaaccagcagatagaggatccaccaatctcgagattt
acttggaccatcgaaaacctatcaagagtcaatgcaaagaagctctactctgaaaccttt
gttgtcggaagcttcaagtggcgagttttgattttcccaaggggaaataatgttgaattc
ttgtctatgtatttggacgttgctgattcatctgtcttgccctatggatggactagatat
gcacagttcagcctctcagtggttaatcaaattcacagcaagtttacaataagaaaagag
acacaacatcagttctctgctcgagaaagcgattggggtttcacttcatttatgcctttg
agtgaactctacaatcccagtagaggttatcttgtaaatgacacttgtataatagaagca
gaggttgctgtctgtaaagttgttgattactggagttatgactctaaaaaggagactggt
tttgtgggccttaaaaatcaaggtgccacttgctatatgaattctctccttcagactctc
tatcacattccatatttcagaaaggctgtttaccacatgcccactactgaaaacgatatg
cccgcaggaagcattccattagctcttcaaagtctcttttataagttgcagtataatgat
agcagtgtctctacaaaggagctaacaaaatcttttgggtgggacatgcacgattcattt
atgcagcacgatgtgcaggaactaaatagagttctttctgagaagttggaagataagatg
aagggaactgttgtggagggcacaatacaacaattatttgaagggcatcacatgaattat
atcgaatgcatcaatgttgatttcaaatcaacaaggaaggaatccttctatgacttgcag
cttgatgtcaaaggttgtcaggatgtctatgcttcattcgataagtatgtggaagtggag
cgcttggaaggtgataacaagtatcacgcagaacagcatggtttgcaggatgcaaagaaa
ggcgttcttttcatcgacttccctcctgttctgcaacttcagcttaaacggtttgaatac
gatttcatgcgtgacacaatggtgaagataaatgaccgttatgagttcccacttcagttg
gatcttgatagagatgatggaaagtatttatctcccgatgcagacaggaatgtgcgaaat
ctttacactcttcacagtgttcttgtccatagtggtggtgttcatggtgggcattactac
gctttcatacgaccaacactttcagatcagtggttcaagtttgatgatgaacgtgtaaca
aaagaagatggaaagagggcattggaagaacaatatggtggtgaggaggagctaccacag
actaatcctggcttaaacaatacccctttcaagttcactaaatattcaaatgcatacatg
cttgtatacattcgtgagagcgacaaggataaaataatttgtaatgtggatgagaaggac
atagctgagcaccttcgaattagactggaaaaggaccgcgaagagaaggagcgtcggaaa
aaggagaaagctgaggcccacctatataccatcattaaggttgctagggatgatgacttg
actgctcagatagggaaagatatatattttgatcttgtcgatcatgataaagtccagagc
ttccgtatacagaagcagatgccatttactcaattcaaggaggaggtagcaaaggaattt
ggtattcctacgcagtttcaacgattttggttgtgggccaagcggcagaaccatacctac
cgaccgaacagaccattgactcctcaagaagaagcactcactgttggacaattaaaggaa
gcagcaaacaaggcccacaatgcagaactgaaattgttcttggaagttgagcttggactg
gacctaaaacctctagctctaccagacaagaccagagaggatatattgcttttcttcaaa
ctctatgatcctgaaaaggaacaactgcggtatgttggtaggctctttgtgaaggtttca
ggaagaccacaggatattctgccaaaattgagaaaaatggctggctttttgcaagatgat
gatgttgagctttatgaggaaattaagtttgagccgaatgtgatgtgtgaatacattgat
aatagaattatatttcggtcttgccagcttgaagatggcgacattgtttgttttcaaaaa
tccccaaagccagatactgctgaccagtatagataccctgatgtcccatcctttctgttg
tatatgcgtaacagacagcttgtccacttccgttcgttggagaagcccaaggaggatgac
ttttgcctagagatgtcaaaaatcttcacatacgatgaagttgtagagaaagtcgctgaa
aaaattggtgttgatgacccatcaaaaatccgtcttacttcacataattgttactctcaa
cagccgaagcctcaaccaattaagtacagaggcgttgaccgtttgctagatatgctgatt
cactataaccagacttctgatattctatactatgaagtattggatatacccctgccagaa
ttacaagcattgaagacattgaaagttacatatcatcatgccactaaggatgaggtgtca
gttcatagtatcaggttgccaaaaaatagcactgttggtgatgtgctaaatgatatcaaa
tcgaaggtcgagctttctcatcccgatgctgaactccgattacttgaagttttctaccac
aagatatacaagattttcgcacccagtgagaagatagaaaacatcaacgatcagtactgg
acactgcgtgcagaagaggttccggaggaggagaaaaaccttggcccttttgatcgcttg
attcacgtataccattttaccaaagacactcaaaaccaaacgcaagttcagaattttgga
gaacctttctttatggttattcgggaggatgagaccttatcttctattaaagaacgtttg
cagaaaaagctcaaggtttcagatgaagatttctccaagtggaaatttgcgtacatatca
cttggtcgcccagactattttgaagattctgatactgtagccacgagatttcagagaaac
atgtatggagcgtgggagcagtatcttggactggagcacccggacacagctccaaggaag
gcacacactgctaaccagaaccgccattcatttgagagacctgtaaagatctataactag
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