Lolium rigidum (rigid ryegrass): 124677684
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Entry
124677684 CDS
T09103
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27-like
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124677684
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124677684
04121 Ubiquitin system [BR:
lrd04121
]
124677684
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124677684
Peptidases and inhibitors [BR:
lrd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124677684
Membrane trafficking [BR:
lrd04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
124677684
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124677684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
124677684
NCBI-ProteinID:
XP_047069603
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All DBs
Position
7:134307805..134312574
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AA seq
538 aa
AA seq
DB search
MGKIEHGNLLASLDEGHRHGYSLTAVAVGLGIGIAGLCKALHSSLVIPWILRKLFSESER
VYYTAGLRNLGNNCFLNVILQALASCDHFVSSLDDLLGSDDVLPEDQSERMPLIFALSSL
LEDLSTVRDERIVLNPQSVMHALSFYVSHFNLTRQQDASEAFGHLLTSVRDEFSHCYVPY
KSSLADITMFHSKVYKQREGNQSECERWKQNIFGPFDGTIGSTLSCRNCSSVLSLDFENF
HCLPLSPVPDINGDIISGCSLVDCLKHFTVLEQLDHYRCDHCWHNAAAKYFSLKSEVDEE
KVNKLRTCVDYDSCNCKQLFGPDKSTWSVSSKATKQLAITRCPKILCIHLLRASVSLSGE
LVKRQGHISFPLLLDLSPFAGGTFSTGQGPGPSAMNKQIYDLPSLHLYQQLNAQMPINTF
PTGGNSSSQPRKDEVSNGGGCSLYKGNAGVATSTSSSWSTSFSTRKELYTLSAVVEHYGI
CGGGHYAAYRRVASNPDANDQVRPRGKHWVYISDDHVSQVSEVDVLAAEATLLFYERL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagattgagcatggcaatctgctggcgtcgcttgacgaaggacacagacatggt
tatagtcttacagctgttgctgttggacttgggataggaattgctgggttgtgcaaagcg
ctgcatagcagcttggtcataccgtggattcttcggaagctcttttcggaatcagagaga
gtatactacactgcaggcctaagaaatcttggcaataattgctttcttaatgttatcctg
caggcacttgccagttgcgaccattttgtgtcctctctagatgatttgcttggaagcgat
gatgtgctacctgaggatcagtctgaaagaatgcctcttatctttgctttaagttccctt
ttagaagacttgagcacagttcgggatgaaagaattgtattgaatccccagagtgtgatg
catgctttgagtttctatgttagtcacttcaatttgacaagacagcaggatgcttcagaa
gcttttggtcatcttttgacatcagtgagggatgaattttcccactgctatgtaccatat
aagagctctcttgcagacattaccatgtttcactccaaagtgtacaagcaaagggaaggt
aaccaatccgaatgcgagcgctggaaacaaaacatatttggtccatttgatgggactatt
ggcagcacattatcttgcagaaattgttcatctgtgctgtccttggacttcgagaatttt
cattgcttgcctctctcacctgtacctgacataaatggagatattatcagtggttgtagt
ttggttgattgcctgaagcacttcactgtgttggagcaacttgaccattaccgctgtgac
cattgttggcataatgctgctgccaaatatttctctcttaaatcagaagtcgacgaggaa
aaggttaacaaactgcgcacctgtgtcgattatgacagttgcaactgcaagcagttattt
ggtccagataaatcaacatggtcagtatcttcgaaagcaacaaagcagttggctatcact
cgctgtccgaagatcctgtgtattcatttgctacgtgcttcagttagtctatctggtgaa
cttgtaaagcgtcagggacacatttcgtttcccttacttctggatctaagtccatttgca
ggaggaacattcagcacaggacagggacctggaccttcagctatgaacaagcaaatatat
gacctgccgtctctgcatctctatcaacaactaaatgcgcagatgcctattaatacgttt
cctaccggtgggaactcatcgagtcagccgcgtaaggatgaagtgtcaaatggcggtggc
tgctcactttacaagggaaatgctggtgtggctacgagtacttcgtcatcgtggtcaaca
tcattctccacaaggaaggagttatacactctctcagctgtcgttgagcactacggtata
tgcggaggtgggcattatgcagcatacaggagagtagcatcaaatcctgatgccaatgat
caagtgcgacctcgtggcaagcactgggtttacatctcagatgatcacgtatcacaagta
tcagaggtcgatgttttggctgcggaagccaccctccttttctacgaaagactgtag
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