Lolium rigidum (rigid ryegrass): 124678052
Help
Entry
124678052 CDS
T09103
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Module
lrd_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124678052
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
124678052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
124678052
NCBI-ProteinID:
XP_047069947
LinkDB
All DBs
Position
7:complement(20881636..20886700)
Genome browser
AA seq
553 aa
AA seq
DB search
MSALYYEKRRHLFVLLSLSLTLAAAASDVSFYPSAETAAAAHCDGTLYPELCLSTLATVP
DLHKKSLPEVITHACNRTETDVTAMSSNCSSYFRGKSLSARDRRALSDCVELLDTTMDDL
RATISDLQDPAKSPIMDHCMTVLSAAITNQQTCLEGFSYQKGGDVLSHVEPGISHIARMV
SNSLAMTRKLPGAGAPSPSTSSVHEERQPFTGYGQMVKGFPRWVKPGERRLLQAPASGIK
ANAVVAKDGSGAYTTVSAAVAAAPTNSKSRYVIYIKAGTYLENVEVGKNQKNLMFIGDGI
GKTVIKASLNVVDGSTTFRSATLAVVGDNFLARDLTIENSAGPSKHQAVALRVGADLSAF
YRCSFVGYQDTLYVHSLRQFFRECDIYGTIDFVFGNSAVVLQSCNLYARRPLASQSNIYT
AQGRTDPNQNTGISIQKCKVAAASDLAAVQSSFRTYLGRPWKQYSRTVYLQSELDSVVDP
AGWLEWDGTFALDTLYYGEYQNTGAGASTSNRVKWKGYRVISSSSEASTFTVGSFIDGDV
WLAGTSIPFSTGL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccttgtactacgagaaacgaaggcatctcttcgtcctcctcagcctcagcctc
actctcgccgccgccgcatctgatgtctccttctatccctctgcggagaccgccgctgcg
gcgcactgcgacggcacactgtaccctgagctctgcctgtccacgctcgccaccgttccg
gacctccacaagaagtccctcccggaagtcatcacccacgcctgcaaccgcacggagacc
gacgtcaccgcaatgtcttccaactgctcctcctacttccgcgggaagtcgctcagcgcg
cgcgaccgccgagccctgtcggactgcgtggagcttctcgacaccaccatggacgacctc
cgggccactatctccgacctgcaagaccccgccaagagcccgatcatggatcactgcatg
accgtcctctccgccgccatcaccaaccagcagacgtgcctcgagggcttctcgtaccag
aagggcggcgacgtgctctcccacgtcgagcccggcatcagccacatcgcccgaatggtc
agcaactcgctcgccatgaccaggaaattgcccggagccggagcgccttcgccgtccacg
tcgagcgtgcatgaagagcggcagccgttcacggggtacgggcagatggtcaaggggttc
ccgcggtgggtgaagcctggtgaaaggcggctgctgcaggcaccggcgtcgggcataaaa
gccaatgcggtggtggccaaggacgggagcggggcgtacacgacggtgtccgcggcggtc
gcggcggcgccgaccaactcgaagagcaggtacgtcatatacatcaaagccggcacgtac
ttggagaacgtggaggtggggaagaaccagaagaacctcatgttcatcggggacggcata
ggcaagacggtcatcaaagccagcctcaacgtcgtcgacggctccaccaccttccgctcc
gccacactcgcggtggtgggcgacaacttcctggcccgcgatctgaccatcgagaactcg
gccggcccgtcgaagcaccaggcggtggcgctccgcgtcggcgccgacctgtcggctttc
taccgctgcagcttcgtgggctaccaggacaccctgtacgtgcactccctccggcagttc
ttccgcgagtgcgacatctacggcaccatcgacttcgtgttcggcaactccgccgtggta
ctccagagctgcaacctctacgcgcggcggcccctggcgagccagagcaacatctacacg
gcgcagggccggacggacccgaaccagaacacgggcatctccatccagaagtgcaaggtc
gccgccgcgtccgacctcgccgccgtgcagtcgagcttccggacgtacctcggcaggccg
tggaagcagtactcccgcacggtgtacttgcagtcggagctggacagcgtcgtcgacccc
gcggggtggctcgagtgggacggcaccttcgcgctcgacacgctctactacggcgagtat
cagaacaccggggccggagctagcacgtccaaccgggtgaagtggaagggttaccgcgtg
atcagcagctcgtcggaggccagcaccttcactgtggggtcattcatcgacggcgacgtc
tggctagccggcacttccatccccttctccaccgggttgtga
DBGET
integrated database retrieval system
