Lolium rigidum (rigid ryegrass): 124678170
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Entry
124678170 CDS
T09103
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124678170
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124678170
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124678170
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
PHD
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
124678170
NCBI-ProteinID:
XP_047070041
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All DBs
Position
7:325278776..325281378
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AA seq
273 aa
AA seq
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MSHRFLLLLLAATTTAVRPCAAVIRLGATSFLDAPARFGPRVTGDGICGSLRAADPANAC
APIKNGPGSGPGMAFVLIERGNCSFEGKVREAQLAGFDAAVVYDDEEKSSLYSMVGDPED
IHIPAVFVSKMAGETLKKFARGEDGECCINSSMDETAGTVLVMSFVSLVVIISVLASFLF
ARNCRLLRHGVDNRPPYIKKHVVEKLPCSVYKAQCSSGENFEEACAICLEDYDNGDMLRL
LPCKHEFHVACIDPWLTKWGTFCPVCKLEVITG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccgcttcttgctcctgctcctcgccgccaccaccaccgccgtccgcccctgc
gcggccgtcatccgcctgggcgccacctctttcctcgacgcccccgcgcgcttcgggccc
cgggtgaccggcgacgggatatgcgggtcgctgcgcgccgcggaccccgccaacgcctgc
gcgcccatcaagaacggccccggctcgggccccgggatggcgttcgtgctgatcgagcgg
gggaactgcagcttcgaggggaaggtgcgggaggcccagctcgccgggttcgacgccgcc
gtcgtgtacgacgacgaggagaagtccagcctctactccatggttggtgatcccgaagac
atacacatccctgcggtattcgtatccaaaatggctggggagactttaaagaagtttgct
agaggtgaagatggtgaatgctgcataaactcatcgatggacgagactgcagggacggtg
ttggtaatgtcatttgtatcacttgtcgtgatcatatcagttttggcttcgtttcttttc
gctaggaactgccgacttctacgccatggagttgataaccgtccaccttacatcaagaaa
catgtagtggaaaagctcccttgctctgtatataaagctcagtgttcaagtggcgaaaat
tttgaagaagcttgtgccatttgtttagaagactatgataatggtgacatgcttagactt
ctcccatgcaaacatgaatttcacgtggcgtgcattgatccctggctgacaaagtggggt
acattctgccccgtatgcaaacttgaagtaatcacaggttaa
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